Protein

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Genbank accession
USL90122.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYQAGTATSYRDLLSKIKSFAVANGWVAVRDTGSSYPREVTLTSTGVSGQEDVAVCFKEEETPASDRYNLAIKVSTQTGNIAFDQVTGAGARYLYLWNDPIPYHLFVSADRIMVVATVSTTAHTAYMGNIKTFCSVGHWFTHAGLFAEGSDSTWNWGNSSISNFMQINSSTRTLLYGADGNIFTPNALWPLTDSFKDAGNYSKFNLVEMMIGHTSAGTHYGFFGEFENVKYINGAGVAHLDNIEVNGKNYLVVQNYSRTGVNDFFAVEKA
Physico‐chemical
properties
protein length:271 AA
molecular weight: 29691,69970 Da
isoelectric point:5,59878
aromaticity:0,13284
hydropathy:-0,14391

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USL90122.1
1 271
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1408
Central domain 11 201 192 0,0040
C-terminal 202 271 69 0,9988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-201
C-terminal
202-271

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_CHI
[NCBI] 		2950474 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USL90122.1 [NCBI]
Genbank nucleotide accession
ON457559 [NCBI]
CDS location
range 33528 -> 34343
strand -
CDS
ATGGCATATCAAGCAGGAACCGCAACAAGCTATCGTGATTTGTTGTCCAAAATTAAAAGCTTTGCAGTCGCTAACGGGTGGGTGGCGGTTCGCGACACGGGGAGCAGTTACCCACGTGAAGTAACTCTCACATCTACCGGAGTAAGTGGGCAAGAAGACGTAGCGGTTTGCTTCAAAGAGGAAGAAACACCCGCGTCCGACCGTTATAATTTAGCCATAAAAGTGTCTACTCAGACGGGTAATATTGCTTTTGATCAAGTAACGGGTGCGGGAGCTCGTTACTTGTATTTGTGGAACGATCCAATCCCTTATCACTTATTCGTAAGCGCGGATCGAATAATGGTAGTTGCCACCGTTTCAACAACTGCGCACACAGCCTATATGGGTAACATCAAGACGTTTTGCAGTGTGGGACATTGGTTTACACACGCTGGCTTATTTGCGGAAGGTTCCGATTCGACTTGGAATTGGGGTAATTCAAGCATTAGTAACTTTATGCAAATCAATAGTTCAACGCGAACGTTGTTGTACGGCGCTGACGGTAATATCTTTACACCGAACGCATTGTGGCCACTTACCGATAGCTTTAAGGATGCAGGTAACTACAGCAAATTCAACCTTGTAGAAATGATGATTGGCCACACTTCAGCGGGGACACATTACGGGTTCTTTGGTGAATTTGAAAATGTGAAATACATCAATGGTGCGGGCGTTGCTCATTTGGACAATATTGAAGTAAATGGTAAAAACTATCTAGTTGTGCAGAATTATTCACGCACGGGTGTAAATGACTTCTTTGCGGTGGAGAAAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8185d9471846377b8aa506cba36ab0a7e9451ab7c6f8ec6965976704221eb7a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7718
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50