Protein

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Genbank accession
XYS96605.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MRHPWMRTTGVNSICLRGETLNRNMYGHMGPRYGQSSNPVGGPYAHNIQTESYQEVQYKAGFFRGPPNNFMGWENTDNNNAGSGWGNNAIYRDNNFRVPKRVRWYITNMKYNGQGFYAEDVFGSRNQEIKISPREFIVNGINLMNTGWKFINQNDINYSPGNRPDIKVIATNVARFSGNPTVGNNGYVHFNQPLTRPDNGAEFGQGNISEMHVTTVGVYNFRSDAQWYVKSNPPEIGNQWGPVWSESTRPLRLVGGTGFADIGGNLRTSGNASHHLATLWLGVNNSRNGACVVTLDWKNDEWIAAAGIGCYNPLEDLTQWSEVDSRLRIFGNHFQKRVHQIMCLPVNMCVPFHFIRGTVTQCGVIPGNNAMQMKAMWAPATTNSATQGDYAIIYWLIARADGSVEVWVNVEMSNIMNMRVILPEVRIAVQRLA
Physico‐chemical
properties
protein length:433 AA
molecular weight: 48682,25330 Da
isoelectric point:9,07104
aromaticity:0,11085
hydropathy:-0,45635

Domains

Domains [InterPro]
IPR059609
RBD
1–433
IPR059609
XYS96605.1
1 433
Architecture
RBD
RBD 1-433
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS96605.1
1 433
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,0006
Central domain 169 367 200 0,0850
C-terminal 368 433 65 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-367
C-terminal
368-433

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnLmqsRe28-2
[NCBI] 		3436271 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS96605.1 [NCBI]
Genbank nucleotide accession
PV759140 [NCBI]
CDS location
range 700 -> 2001
strand +
CDS
ATGCGCCACCCATGGATGCGTACCACAGGAGTTAATAGTATATGTTTGCGTGGTGAGACTCTCAACCGTAATATGTACGGACATATGGGGCCTAGATATGGGCAGAGCTCCAATCCGGTTGGTGGTCCTTATGCTCATAACATCCAGACTGAGTCTTATCAGGAGGTTCAGTACAAAGCAGGTTTTTTCCGTGGTCCGCCCAATAACTTTATGGGGTGGGAGAACACAGATAACAACAATGCTGGTAGTGGTTGGGGTAACAACGCTATTTATAGGGATAACAACTTCCGTGTTCCTAAGCGTGTTCGCTGGTATATTACTAACATGAAATACAATGGGCAGGGGTTCTATGCAGAGGACGTATTTGGCTCTCGCAACCAAGAGATTAAAATCAGCCCTAGAGAGTTCATTGTAAACGGTATAAACTTAATGAACACCGGGTGGAAGTTTATAAACCAGAACGATATAAACTACAGCCCAGGTAATAGACCGGACATCAAGGTTATTGCAACCAATGTTGCTAGATTTAGTGGTAATCCTACTGTTGGTAATAATGGATATGTTCACTTCAATCAGCCTCTAACTCGACCAGATAATGGTGCGGAATTTGGGCAAGGTAACATAAGTGAGATGCATGTAACCACTGTAGGAGTTTACAATTTTAGATCTGATGCGCAGTGGTATGTAAAATCTAACCCACCGGAAATCGGAAACCAGTGGGGTCCAGTATGGTCTGAATCAACTCGACCTCTCCGCCTAGTGGGCGGTACCGGCTTCGCCGATATTGGAGGGAACCTACGTACTAGTGGTAATGCTAGTCACCACCTGGCTACCTTGTGGTTGGGGGTTAATAACTCCCGAAATGGGGCTTGCGTCGTCACTCTAGACTGGAAAAACGATGAGTGGATTGCTGCTGCAGGGATTGGATGTTATAACCCTCTAGAAGATCTTACCCAGTGGAGCGAGGTAGATAGTAGGCTGAGAATTTTCGGAAATCACTTCCAGAAACGTGTGCATCAAATCATGTGTCTTCCAGTTAACATGTGTGTGCCGTTCCACTTTATACGCGGGACCGTAACCCAGTGTGGGGTTATTCCTGGGAACAACGCCATGCAAATGAAGGCTATGTGGGCGCCTGCTACTACCAACTCTGCCACTCAGGGCGATTATGCCATTATCTATTGGCTGATAGCTAGGGCTGACGGTAGTGTTGAAGTTTGGGTTAACGTTGAGATGAGCAATATCATGAATATGCGAGTGATTCTTCCTGAGGTTAGGATTGCTGTGCAAAGGCTTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
09dfd1bbe10910dbbd7e610561d57d9a4ae902db4f69edb08cbb3895cc2a4bab
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5263
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50