Protein

View in Explore
Genbank accession
ATE84665.1 [GenBank]
Protein name
tail fiber protein J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAIFSGLGALISGALFGGSLLAAKLIGGALAFGAQLGLNKLTNKQQKKQKFTAVQGEVQMGGDVPVDALLGTGKTRGQRAYYAKWGKGNKVNADVFILGNGWSDGLENHVYFYGEKKNLIARPLIGGEVAHLGVEGFGDLVSIRFYDGRPGQPVDQKLVNDTAGLGKVWKPTSRLSGLTYVVVERRYDSSKFDKGRPEFEWVLRGLREYDPTKDSTVAGGNGPQRLSDPSTWTHTLNPAIHRLNYQLGLRGLRSGRTLIGEGKSLGQLDLSSYFVAINYCRTLRKGKPIYQCSLWVNSETDHTEALSAFDDAMAGYGLNRRGLSGVVVGAPQIPVLEITEKDIPADRPKPRQPRKSAFDLFNHLSGQFTSPEAMWNPESLKPIVVNADVAADKRARQTAIDFLQVSDADIAQYLLNVRYRQNRKGGTATVPVSRRVGLKAMEGEWVSYLGKVWMISEWRCDEDLRFTFVLTEAGADIYDDGDIDPGPIVVPPTPPINPSQLFTVQNFDVHAGMIQGGNGFDVPALEFVWDPPDDPTITDVLFVYRIDGAAEEFADQCAEPEGGRYRTTKNVISEKAYVARATIKTNPDRLRNFTPWRTTSTITGSLNVQIGLGQVRDDVKDRFEELQGEFDGVWRRLEELTAAFSLDGAVGEIKRQELKAAVGDAFAQIVTEQRVRASQDEALSQLYTALTATVGNNLARLITEETARATADSALSSRIVSLNAEVDGNLARLATEEQARATADSALSSSITGVSADVNGRFAGGLVKFEAAADQSGVTSRFSVMLRANLASAFKDSGFYIEIYSEGGVLKSRFAVKADQFVIWNGGSNAFLPIVIENGELKLNIANIGLVRSGRLLAQNNKMDINLNLGTIEIYS
Physico‐chemical
properties
protein length:876 AA
molecular weight: 95487,66520 Da
isoelectric point:6,02746
aromaticity:0,08562
hydropathy:-0,24224

Domains

Domains [InterPro]
DC_0187
STR
1–870
DC_0187
IPR053171
Unmapped
642–862
IPR053171
IPR015406
RBD
778–849
IPR015406
ATE84665.1
1 876
Architecture
STR
STR 1-870 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage phi2LM21
[NCBI] 		2029632 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sinorhizobium sp. LM21
[NCBI] 		1449788 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Rhizobiaceae > Sinorhizobium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATE84665.1 [NCBI]
Genbank nucleotide accession
MF614627.1 [NCBI]
CDS location
range 29191 -> 31821
strand +
CDS
ATGGCTATCTTTTCCGGTCTGGGCGCGCTGATCTCCGGCGCGCTCTTCGGCGGCTCGTTGCTCGCTGCCAAGCTCATCGGGGGTGCGCTGGCATTCGGCGCGCAGCTCGGGCTGAACAAGCTCACCAACAAGCAGCAGAAGAAGCAGAAGTTCACGGCCGTCCAGGGCGAAGTGCAAATGGGCGGCGACGTGCCTGTCGACGCGCTGCTCGGTACCGGCAAGACGCGCGGGCAGCGCGCCTATTACGCCAAGTGGGGCAAGGGCAACAAAGTCAACGCTGACGTCTTCATTCTGGGCAACGGCTGGTCTGACGGCCTCGAAAATCACGTCTACTTCTACGGCGAGAAGAAGAACCTCATCGCCCGGCCGCTGATCGGTGGTGAGGTCGCGCATCTCGGCGTCGAAGGCTTCGGCGATCTCGTCTCGATCCGCTTCTATGACGGCCGCCCGGGCCAACCCGTCGACCAGAAGCTGGTCAACGATACCGCGGGGCTCGGCAAGGTCTGGAAGCCGACCAGCCGCCTGAGTGGTCTGACCTATGTCGTCGTCGAGCGCCGCTATGACAGCTCGAAGTTCGACAAGGGTCGTCCGGAGTTCGAATGGGTGCTGCGTGGCCTGCGCGAGTACGACCCGACGAAGGATTCGACGGTCGCCGGTGGCAACGGCCCGCAGCGGCTCAGTGATCCCTCGACGTGGACGCACACGCTGAACCCGGCAATCCATCGGCTCAACTATCAGCTGGGCCTCAGGGGCTTGCGTTCGGGTCGCACGCTGATCGGCGAAGGCAAGTCGCTCGGCCAGTTGGACCTGTCGTCCTACTTCGTCGCGATCAACTATTGCCGCACACTGCGAAAGGGCAAGCCAATCTATCAGTGCTCGCTCTGGGTCAATTCCGAGACCGATCACACCGAGGCGCTTTCGGCCTTTGACGATGCCATGGCTGGCTACGGGCTAAACCGCCGCGGCCTTTCGGGCGTCGTCGTCGGTGCGCCCCAGATCCCGGTGCTTGAGATCACCGAAAAGGACATTCCGGCCGACCGACCGAAGCCGCGCCAGCCGCGCAAATCGGCCTTCGATCTGTTCAACCACCTGTCCGGCCAGTTCACCTCGCCCGAGGCGATGTGGAACCCGGAGAGCCTGAAGCCGATCGTCGTCAATGCTGACGTAGCGGCCGACAAGCGTGCCCGTCAGACCGCGATCGACTTCCTGCAGGTCTCAGACGCCGATATCGCGCAGTACCTTTTGAACGTTCGCTATCGCCAGAACCGAAAGGGCGGCACGGCGACAGTGCCTGTCAGCCGTCGCGTCGGCCTGAAGGCGATGGAAGGCGAGTGGGTCAGCTATCTCGGGAAGGTCTGGATGATCTCCGAATGGCGCTGCGACGAGGATCTGCGCTTCACCTTCGTGCTCACAGAGGCCGGCGCCGACATCTACGACGATGGCGATATCGATCCGGGCCCGATTGTCGTGCCGCCCACGCCGCCGATCAATCCGTCGCAGCTGTTCACGGTGCAGAACTTCGACGTTCATGCCGGCATGATCCAAGGCGGCAACGGCTTCGATGTGCCGGCGCTCGAATTCGTCTGGGATCCTCCGGACGATCCGACGATCACGGATGTGCTCTTTGTCTACCGGATCGACGGCGCCGCAGAAGAGTTCGCAGACCAATGCGCCGAGCCGGAGGGCGGTCGGTACCGGACCACCAAGAACGTCATCTCGGAGAAGGCCTATGTCGCGCGGGCGACGATCAAGACGAACCCTGACCGGCTGCGTAACTTCACGCCCTGGCGCACCACGTCGACGATCACCGGATCTCTGAATGTTCAGATCGGTCTCGGTCAGGTCCGCGACGACGTCAAGGACCGCTTCGAAGAGTTGCAAGGCGAGTTCGACGGCGTATGGCGGCGTCTTGAAGAGCTGACGGCCGCCTTCTCGCTCGACGGCGCCGTCGGTGAAATCAAGCGGCAGGAGTTGAAGGCGGCGGTCGGTGATGCTTTCGCGCAGATCGTCACCGAGCAGCGAGTCCGCGCGTCGCAGGATGAGGCGCTCTCGCAGCTCTACACCGCGCTGACGGCGACGGTCGGCAACAACCTCGCACGACTGATCACCGAGGAGACCGCTCGCGCCACAGCCGACAGTGCCTTGAGTAGCCGCATCGTCTCGCTAAACGCGGAGGTCGACGGGAACCTCGCGCGATTGGCGACAGAGGAACAGGCGCGAGCCACCGCTGACAGTGCACTTTCGTCAAGCATCACAGGCGTCAGCGCCGATGTGAACGGCCGGTTCGCCGGCGGTCTGGTGAAATTCGAGGCGGCCGCTGACCAGTCGGGCGTCACCTCTCGCTTTTCGGTGATGCTGCGCGCGAACCTCGCGTCCGCGTTCAAGGACAGCGGTTTCTACATCGAGATCTACTCGGAGGGCGGGGTGCTTAAATCCCGCTTCGCGGTGAAAGCTGATCAGTTCGTCATCTGGAATGGTGGCAGCAATGCCTTCCTGCCGATTGTCATCGAGAACGGCGAACTGAAGCTCAACATTGCCAACATCGGCTTGGTTCGCTCCGGGCGATTGCTCGCCCAGAACAACAAGATGGACATCAACCTCAATCTCGGAACGATCGAGATCTACAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8dba8df6fbdfd2c11f54dcad9f5750860138e5a801938e08431abd929dd63676
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7817
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Sinorhizobium sp. LM21 Prophages and Virus-Encoded DNA Methyltransferases in the Light of Comparative Genomic Analyses of the Sinorhizobial Virome Decewicz,P., Radlinska,M. and Dziewit,L. 2017 28672885 GenBank