Protein

View in Explore
Genbank accession
UVD41575.1 [GenBank]
Protein name
long tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNITKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRGVSTNGTVEYLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGSPFGGGKISLNPSNLLDGDGNGGGVYEFGLTKSSRTSLTISNDVYFNLGSQRGSGANANRGTINKIIGVRK
Physico‐chemical
properties
protein length:488 AA
molecular weight: 54070,91250 Da
isoelectric point:5,74394
aromaticity:0,09221
hydropathy:-0,46148

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
6–130
G3DSA:2.60.40.3350 DC_0143 cd19958 DC_0151
IPR018913
ATT
6–152
IPR018913 Coil cd19958
UVD41575.1
1 488
Architecture
ATT
STR
STR
RBD
ATT 6-152 | STR 153-258 | STR 280-338 | RBD 339-488
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage 1PHSA12
[NCBI] 		2961989 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD41575.1 [NCBI]
Genbank nucleotide accession
ON856257.1 [NCBI]
CDS location
range 6117 -> 7583
strand +
CDS
ATGAGTAATTTAGAGAAATCTGTAGCTATAAATTTAGAAAACACAGCGCATTATGAAAATATTTCAAATCTAGATATAACTTTTAGAACAGGAGAGAGTGATTCTTCTGTTCTTCTTTTTAATATCACTAAAAATAATCAACCGTTATTATTGAGTGAAGAAAATATCAAAGCACGAATAGCGATTCGAGGTAAAGGAGTCATGGTAGTTGCTCCACTAGAAATATTAGATCCATTTAAAGGTATTTTAAAATTTCAATTACCTAATGATGTAATTAAACGAGATGGAAGTTATCAAGCTCAAGTTTCGGTTGCAGAATTAGGTAATTCAGACGTGGTAGTTGTCGAGAGAACTATCACATTTAACGTTGAAAAAAGTTTGTTTAGCAAGATTCCCTCTGAAACAAAACTACACTATATTGTTGAGTTTCAAGAATTAGAAAAAACTATTATGGATCGCGCGAAAGCAATGGACGAGGCTATAAAAAATGGTGAGGATTATGCGAGTCTGATTGAAAAAGCTAAAGAAAAAGGTCTATCAGATATTCAAATAGCAAAATCTTCAAGTATTGATGAATTAAAGCAACTTGCTAATAGCCGTATATCTGATTTGGAAAATAAAGCGCAAGCATATTCAAGAACATTCGATGAGCAAAAGCGATATATGGATGAGAAACATGAAGCCTTCAAGCAGTCAGTGAATAGTGGTGGTTTAGTCACAAGTGGTTCTACTTCAAATTGGCAAAAAGCTAAGATTACTAAAGATGATGGTAAGATAATGCAGATTACTGGATTTGATTTTAATAATCCAGAACAAAGAATAGGTGATTCAACCCAATTTATTTATGTTTCGCAAGCTATAAATTATCCAAGAGGTGTTAGTACTAACGGTACTGTCGAATATTTAGTAGTAACTTCAGATTACAAGCGTATGACTTATCGACCGAACGGTACAAATAAAGTGTTTGTTAAAAGAAAAGAAGCGGGTTCATGGTCTGAGTGGTCAGAATTAGCTATTAATGATTACAATACACCTTTTGAAACTGTTCAAAGTGCCCAATCAAAAGCTAATATGGCCGAAAGTAACGCTAAATTATACGCAGATGACAAGTTTAATAAAAGGTATTCGGTTATTTTTGATGGAACAGCAAATGGTGTGGGCTCTACATTGTACTTAAATGAGAGTTTAGACCAATTTATTTTATTAATTTTTTATGGAACTTTTCCAGGTGGTGACTTTACAGAGTTTGGCAGTCCTTTTGGAGGAGGAAAGATTTCATTGAATCCCTCAAATCTTCTAGATGGTGATGGAAATGGTGGAGGTGTTTATGAGTTTGGGTTAACTAAATCTAGTCGTACATCTTTAACAATATCGAACGATGTTTATTTCAACTTAGGAAGTCAAAGAGGTTCTGGTGCCAATGCAAATAGAGGAACAATCAACAAAATTATAGGAGTGAGAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0e32e191411193c614e38c95e9d4201df4c17db4021eeea9bef648f19a91d98f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8225
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A virulence bacteriophage derived from a temperate one helps to control biofilm formation and skin infections of methicillin-resistant Staphylococcus aureus in mouse models Peng,Z. 2023-02 — GenBank