Protein

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Genbank accession
XYW66000.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLKVGTTIGGSTAWHQGNLPLVPSGVKILYKGNRIYSEADKPTADELNVVSRDGDTMTQRLTIATTNDYPLALESTDAGPSKMLFRRSGVTRLSMGIDASGNFQVGSNDNSGSHSGYGLQIWNASLDASFGGSIQMPTDKGWYIGKGSQIVLRDHNNGNVALSALPKPDGSGAGDLYLGYNSGSAAVTNTVRLESTLTWKNVRTLVNSDGYILRAAMDNPYFSQSEADNRYIRRNVNTVTDSYLLTKSVDYGAGSDSIPAGYSGFFRNNSSNGFMGLTMHVAHPGYANGAYARGLTFNYGGSNTVYTYAFDSAGNKQANIKIYTEADKPTPNEIGALAEGANAVSASKLATGRRISLSGDATGSVVFDGSGDVTLPVTVLNDSHTHNNYVEKTGDTMTGNLIVNAAISANELKAGSDTHKARIVHSGGAVWYQGGSIATDQPNNVAMSGYSGTNLDLFQMRMTDGRSPVVRWGSTDYRIYHEGNRPSELVSISLSGKSCNSAVESGTYSIFSGTTDTPYGSGPSGSTMQVSKWGDTGVQQMFFTYDSDRVFVRRLQGTEWKPWFELYSTSKKPTASDVGALPVNGNAVSATRLQTARLISGVPFDGTSNITISANNVGAYSKSETDDLIKDSGKKTVVINKPAGITADFYVPVVMSQLTNNESVYISTLSGGSSIPMNNCSFNGMVRSGGWSDKGSYVTGQFNIYANGERSLHSVYGSTESEGIVAFYVHEKAFPITVVVDGRVNVSTGASVSAGTAIFTASANPATGNTKATMLAQWADGSGFYQGSSKTPTGQAFNAELDKKLDKSGGIMTGPIRWDAANEYINAAGNSVYIAAKAGRIYLEGSATPMARIGSVDHEIYHAGNKPTSADVGALPISGGTLSGNLTIRHNAPQLWMDEADNSSSKFGFVVDGATIRLNKDTTSGPALFKYQTDGTFAIADPVSSTVQQSRGDSLTRKDWVEGQLNGKAHDSSNFAARYLSSRSIGGATKPTTAGIWSVENSSWTPEAYGSLMVTSNLATPAVGSGTGQWIHYWFQGHTSGAVWTARDVNGAFSGWQKSYDTKNKPTAADVGAIAASNGVSTGRLTLNGDLISSGWLRTTGAVGWYNETYGGGMSMSDTTWVRTYGGKKLFVENGSADAIYTTGGVRGNGGIYDGGHRVYSPANPQPGMSAAQVGAALAALPMDAVGQYAMMYLAVNQGGWLSPGTVRPGSHLRYSTAEGREPAGNIPPGNWRLHGRTHEGGNWGPWQTSIWQRVS
Physico‐chemical
properties
protein length:1258 AA
molecular weight: 133002,40230 Da
isoelectric point:6,90607
aromaticity:0,09141
hydropathy:-0,34921

Domains

Domains [InterPro]
DC_1903
ATT
1–479
DC_1903 cd19958 DC_1209 DC_1233
DC_1592
STR
415–876
DC_1592
XYW66000.1
1 1258
Architecture
ATT
STR
STR
RBD
ATT 1-479 | STR 480-876 | STR 900-1126 | RBD 1171-1258
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYW66000.1
1 1258
Domain Start End Length (AA) Confidence
N-terminal 1 612 612 0,1182
Central domain 613 811 200 0,6896
C-terminal 812 1258 446 0,7831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-612
Central
613-811
C-terminal
812-1258

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS4
[NCBI] 		3448186 No lineage information
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYW66000.1 [NCBI]
Genbank nucleotide accession
PV831792.1 [NCBI]
CDS location
range 116088 -> 119864
strand +
CDS
ATGGCAGATCTGAAGGTAGGAACTACTATAGGTGGTTCAACCGCCTGGCACCAAGGTAATCTGCCATTGGTTCCGAGCGGTGTTAAAATTCTTTACAAAGGCAATCGAATTTATTCTGAAGCAGATAAACCAACTGCTGATGAATTAAATGTCGTTAGTCGTGATGGCGACACAATGACCCAACGATTGACTATCGCTACAACAAACGATTACCCATTGGCGCTTGAATCAACTGATGCTGGGCCATCAAAAATGTTGTTCAGGCGGTCTGGTGTTACTCGCTTATCCATGGGCATTGACGCATCCGGAAACTTCCAGGTAGGTTCAAACGATAATTCTGGATCTCATTCGGGCTATGGACTACAAATCTGGAACGCCTCGCTTGACGCATCATTTGGCGGAAGCATTCAAATGCCGACAGACAAGGGTTGGTACATCGGAAAAGGCAGCCAGATTGTTTTACGCGACCACAACAATGGCAACGTTGCACTTTCGGCACTTCCGAAACCTGATGGTTCAGGCGCCGGCGATCTCTATCTAGGTTACAATTCTGGTTCTGCTGCTGTAACCAACACTGTTCGCCTCGAGTCAACCCTGACTTGGAAAAACGTTCGAACTCTGGTCAACAGTGATGGCTATATCCTTCGTGCCGCTATGGATAATCCGTATTTCAGTCAATCTGAAGCAGACAATCGCTATATTCGCCGCAATGTCAACACCGTAACTGATAGCTATTTGCTGACTAAATCAGTTGATTACGGTGCGGGATCCGACAGTATTCCGGCCGGTTACTCTGGTTTCTTTAGAAACAATAGTTCAAATGGATTCATGGGTTTGACCATGCACGTAGCGCATCCCGGCTATGCCAATGGTGCGTATGCCCGCGGATTAACGTTTAACTATGGTGGAAGCAATACAGTTTATACGTACGCCTTCGATAGCGCTGGCAATAAGCAAGCAAACATTAAAATCTACACTGAAGCCGACAAACCAACCCCGAATGAAATCGGAGCTTTGGCTGAAGGCGCTAATGCTGTTTCAGCGTCAAAACTTGCTACTGGCCGTCGTATAAGTCTGAGCGGCGACGCCACAGGTTCAGTTGTTTTTGACGGTTCAGGTGATGTGACACTTCCGGTAACTGTACTGAACGACAGTCATACGCATAACAATTACGTTGAAAAAACCGGTGATACCATGACCGGCAACCTGATTGTTAATGCTGCCATATCTGCAAATGAGTTAAAGGCAGGTTCGGATACTCATAAAGCGCGTATTGTTCACTCAGGTGGTGCAGTATGGTATCAAGGTGGGTCCATAGCAACCGACCAACCAAACAACGTCGCAATGTCAGGTTATTCTGGGACAAACCTTGATCTGTTCCAAATGCGCATGACTGATGGTCGTTCACCGGTTGTACGTTGGGGTTCAACTGATTATCGCATATATCACGAAGGAAATCGCCCATCTGAGTTGGTTTCTATAAGCTTGTCTGGTAAATCCTGTAACAGCGCCGTTGAATCTGGTACTTACTCGATTTTCAGCGGAACAACCGATACACCATATGGTTCTGGCCCGTCTGGTTCAACTATGCAAGTCTCCAAATGGGGTGATACCGGTGTCCAACAGATGTTCTTCACTTACGATAGTGACCGAGTATTTGTTCGCCGGCTTCAGGGAACGGAGTGGAAACCTTGGTTTGAGCTTTATTCAACCTCAAAGAAACCAACCGCTTCCGACGTTGGTGCTTTACCGGTTAATGGAAATGCTGTATCCGCAACTCGTTTGCAAACTGCTCGCTTGATTTCTGGTGTTCCATTCGATGGCACCTCGAATATCACGATTTCGGCTAACAACGTCGGAGCTTATTCAAAATCTGAAACTGATGATTTGATTAAGGATTCCGGAAAGAAAACAGTTGTGATCAATAAACCAGCCGGCATTACAGCTGATTTTTACGTTCCTGTCGTCATGTCTCAATTGACAAATAACGAAAGCGTTTACATCAGCACACTTTCAGGCGGTTCTAGCATCCCGATGAACAATTGTTCATTTAACGGAATGGTCCGCTCCGGCGGTTGGTCTGATAAAGGCTCGTATGTCACAGGTCAATTCAATATATACGCAAACGGCGAGCGTTCATTGCACTCTGTTTATGGTTCTACTGAAAGCGAAGGCATTGTTGCTTTTTATGTTCACGAAAAAGCGTTCCCGATAACAGTCGTTGTCGATGGTCGTGTGAATGTTAGCACTGGTGCTTCTGTTTCTGCTGGAACAGCCATTTTCACCGCCTCTGCTAATCCTGCGACCGGTAATACAAAGGCAACAATGTTAGCACAATGGGCTGACGGCAGTGGTTTCTACCAAGGTTCATCCAAAACCCCAACCGGGCAAGCGTTTAACGCCGAGTTGGACAAGAAATTGGATAAATCCGGCGGAATTATGACTGGCCCAATTCGATGGGACGCAGCTAACGAGTATATTAATGCTGCTGGCAATAGCGTGTATATTGCTGCTAAAGCCGGTCGTATATATCTTGAAGGCTCAGCCACGCCAATGGCTAGAATTGGAAGCGTTGATCATGAAATTTACCACGCTGGCAATAAACCAACCTCAGCCGACGTTGGCGCTCTTCCAATTTCAGGCGGGACGTTGTCTGGTAATTTGACTATTCGTCACAATGCGCCGCAACTGTGGATGGACGAGGCTGATAACAGTTCTAGCAAATTCGGTTTTGTTGTCGACGGTGCTACTATCCGCCTAAATAAAGATACGACTAGCGGTCCGGCTCTTTTCAAATACCAAACCGATGGGACTTTCGCCATTGCCGATCCAGTATCTTCGACTGTGCAACAATCGCGAGGCGATTCCTTAACCCGAAAGGATTGGGTCGAAGGCCAATTGAATGGAAAAGCGCATGATAGCAGTAACTTTGCAGCTCGATACCTTTCCTCGCGTTCTATAGGAGGTGCAACTAAGCCAACTACTGCGGGTATTTGGTCTGTTGAAAACTCGTCGTGGACACCGGAAGCATATGGCAGTTTAATGGTTACTAGTAATCTGGCGACTCCTGCTGTTGGTTCTGGGACTGGACAGTGGATACATTATTGGTTCCAGGGCCATACCTCAGGTGCTGTTTGGACTGCCCGCGACGTTAACGGGGCATTCTCCGGGTGGCAGAAGTCATATGATACCAAGAACAAACCAACTGCCGCCGATGTTGGAGCTATAGCGGCTTCAAACGGCGTTTCCACTGGTCGTTTGACGTTAAATGGCGATTTGATATCATCTGGTTGGTTGAGAACAACAGGCGCTGTTGGATGGTATAATGAAACCTACGGCGGCGGTATGAGCATGTCTGACACGACATGGGTTAGAACTTATGGCGGTAAAAAACTCTTCGTCGAAAATGGATCTGCTGATGCCATATACACGACAGGCGGTGTGCGGGGCAACGGCGGTATATACGATGGCGGGCACCGCGTATATTCACCAGCTAACCCACAGCCAGGTATGTCTGCTGCACAAGTTGGAGCAGCATTAGCCGCACTGCCGATGGATGCGGTTGGCCAATACGCTATGATGTACTTAGCCGTTAACCAAGGCGGCTGGTTGAGTCCAGGCACCGTCCGTCCAGGATCCCATTTGCGGTATTCTACAGCTGAAGGTCGCGAACCCGCAGGCAATATTCCTCCTGGGAACTGGCGCTTGCACGGTCGTACCCATGAAGGTGGAAACTGGGGCCCATGGCAAACATCCATATGGCAACGTGTTTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c83f2f3f888aa463a0a9a9e93c02c4e091ef4beed98dfb7fda556e58ddd6c1f8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6968
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50