Protein

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Genbank accession
XYS96494.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKTQFNQPQGSTAIEVNRQTLARIWGYPIRSTIYLNTYTNVTGSSIIFEPDTGTMWYTGTAQGTPVSWVVNSKSLTLNTNQGVFTCWPAIALSRDITSETQSIRSFTERADDIPSILDWDSDSSNDDSSRIIRAIADGIRTLYVPSTRTFNIGEIDINTNMLIYGNGISGYRQVGGKFVVAADAEYGFAFTGSGNGNAGNGNRVIGGGLSGLSIIGENSACAADMVRVLHASSHEFRNVSFRLTQGSAFTLEDFMESRIEACYMNNIGADGNPVIYIKDYVDSLPWNVNNLHIRENTFGSCSGNWIHMSDRSNADLIWIHGNKFEWDSTPISPNISSKSVIYAGLVERVSIKDNGFVYFYPAHNMYDTILELGANANYGVTFSDNMAWGCTNANYWKTAGGALAGHNNRSNAPMSTVNTSSYSQDIEEPIIRTSTGNKPTSYAAKKNDVEFISVHQLTGANDSNNFVVDADAVMYGTCMNTPASSEFRRAFIPKDMLSSGRMVKVSLRCKNVNSSDGQLQLLLNGNAITDSVSGQSTGLNYITIPANSGWKEYSWYLNASQLASGGALIFRNNSSVRFLFDGVRIEYARSVSITIPWSATSIPANTVSSTTLAMGSRLVSHIKGVTSVSANGSLGGAVSSAYLRASDNTLVVQLMTAASSATVAATSLTLSLILE
Physico‐chemical
properties
protein length:675 AA
molecular weight: 72980,52040 Da
isoelectric point:5,68307
aromaticity:0,09333
hydropathy:-0,14756

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 IPR011050
IPR011050
STR
121–419
IPR011050
DC_0629
STR
354–675
DC_0629
XYS96494.1
1 675
Architecture
ATT
STR
ATT 1-94 | STR 115-675
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS96494.1
1 675
Domain Start End Length (AA) Confidence
N-terminal 1 117 117 0,9154
Central domain 118 438 322 0,9770
C-terminal 439 675 236 0,9755
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-117
Central
118-438
C-terminal
439-675

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage HMGUkp5
[NCBI] 		3434166 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS96494.1 [NCBI]
Genbank nucleotide accession
PV683293.1 [NCBI]
CDS location
range 104871 -> 106898
strand +
CDS
ATGAAAACTCAGTTTAATCAACCCCAAGGCTCAACTGCCATAGAAGTAAACCGTCAAACTCTAGCGAGAATTTGGGGGTATCCAATCAGATCTACAATTTATTTGAATACATATACCAATGTTACTGGGTCTTCTATTATTTTTGAACCGGATACCGGAACTATGTGGTATACGGGCACCGCACAAGGAACCCCGGTATCCTGGGTCGTAAATTCTAAATCATTGACACTTAACACGAACCAAGGTGTGTTTACTTGTTGGCCTGCAATTGCTTTATCTAGAGACATCACATCTGAAACTCAATCGATCCGGTCATTTACAGAACGAGCAGATGATATCCCTTCTATTTTAGATTGGGATTCCGATAGCTCTAATGATGATAGCTCTAGAATAATTCGTGCTATCGCAGACGGCATCCGTACCCTTTATGTGCCGTCTACCAGAACATTTAATATTGGTGAAATCGATATAAACACCAATATGCTAATTTATGGAAATGGTATCAGTGGTTATAGGCAAGTTGGAGGTAAATTTGTTGTTGCCGCTGATGCTGAGTACGGTTTCGCATTCACCGGTTCTGGCAATGGGAATGCCGGGAATGGGAATCGGGTTATCGGCGGCGGACTTTCTGGATTAAGCATCATTGGTGAAAACTCGGCTTGTGCTGCTGATATGGTTCGTGTTCTTCACGCTTCTAGTCATGAATTTAGAAATGTAAGTTTCAGATTAACTCAGGGTAGCGCATTTACGTTGGAAGATTTTATGGAAAGCCGGATTGAGGCTTGCTATATGAACAATATTGGCGCTGATGGTAATCCTGTAATCTATATCAAAGATTATGTGGATTCTTTGCCTTGGAACGTTAATAATTTACATATTCGTGAAAATACATTCGGTTCCTGCAGCGGAAACTGGATCCATATGTCGGATAGGTCTAATGCTGATTTGATTTGGATTCATGGGAATAAATTTGAATGGGATTCCACTCCCATTAGTCCGAATATTTCTTCAAAATCCGTTATCTATGCTGGTTTGGTTGAAAGGGTTTCTATAAAAGACAATGGGTTTGTATATTTTTATCCTGCCCATAATATGTATGATACGATTTTGGAATTGGGAGCAAACGCCAATTATGGGGTTACTTTCTCTGACAATATGGCATGGGGTTGTACTAATGCGAACTATTGGAAAACGGCGGGTGGTGCTCTTGCGGGCCACAATAACCGCAGTAATGCTCCTATGTCGACAGTCAACACCAGTTCTTATTCCCAAGATATAGAAGAACCTATAATAAGAACCAGTACAGGTAATAAACCAACTTCTTATGCCGCCAAAAAGAATGACGTCGAGTTTATTTCTGTTCACCAACTTACTGGTGCAAATGATAGTAACAACTTTGTTGTCGATGCTGACGCGGTGATGTACGGTACTTGTATGAATACCCCGGCATCTTCTGAATTTCGTAGAGCTTTCATACCAAAGGATATGTTATCTTCTGGTAGAATGGTAAAAGTTTCTCTTCGCTGTAAAAATGTTAATTCCTCTGATGGACAGCTTCAACTTTTACTTAATGGGAATGCTATCACAGATTCGGTTTCAGGGCAATCTACTGGTTTGAATTATATTACGATACCTGCTAACTCTGGTTGGAAAGAATATTCATGGTATTTGAACGCTTCTCAGTTGGCGAGCGGTGGAGCATTAATTTTCAGGAACAATAGTTCAGTTCGATTTCTTTTTGATGGAGTAAGGATTGAATATGCTCGCTCGGTTAGCATTACAATACCTTGGTCTGCAACTTCTATCCCAGCCAATACTGTTTCTAGTACGACGTTGGCTATGGGGAGCAGGTTGGTATCCCATATAAAAGGGGTTACTTCTGTTTCTGCTAACGGATCATTAGGTGGTGCTGTTTCTTCAGCATATCTGAGAGCAAGCGACAATACTTTAGTTGTTCAATTAATGACGGCAGCTTCATCGGCTACGGTAGCCGCCACGAGCTTAACATTGTCTTTAATTCTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
78c4b7f07c710d4cd4b3260fdc36dbfb51cc7497dc37c090a8d56e4200822f33
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8305
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50