Protein
View in Explore- Genbank accession
- WOZ57258.1 [GenBank]
- Protein name
- pentaxin family protein
- RBP type
-
TSP
- Protein sequence
-
MGTISDKLMRIINTKEDIRQALISKGYDVPTSIPFKEYAKMILDLPCKADSFPDIEGIVARYSASGITNEQMAANPVWVDKTGNGHDLQMKNFSWKGMSGVGGYVENYNRWTKSAVRADITFTDHSFNVTSVKINQAQFYYQSSGGEQPFTVPSGTVIVKGLTDGQVLEYIYTDIEGRHVFTVKNDGIYTLPSFEFIAKGAYYGFQFNKVQESCNITIEQLPLYPGALVFDGVDDYGVCDNFPILTKEKGYTVVALRQWISMGEGLYGLVSNVKNWFNDGAFVLEYNSNNATNKFVNRPVSFGNVNIEMDLPNNFTYQTSKSYKGVPITTGSFKGTNSLFVGKLNNIIGNCSNVAIWELVFLDHDATEEELTKIKDYFVKTYPWLFPDQAWTVVGKTNEDEDRATIANITGNGNNLVLSNSGFAEGSGYGLYAENYAGGRWVQSTDRADLTWTSYSVNITSVKVASTQLYYQSYPEQPSFIVPSYKIKVYGLKDGQTLSYRQATSEGQQLYKISEDGTYTLPSFPFKANGDWYGFTLNKVQESCDITIEQIPEYEGYLVTDGVDDKITSSTFEMGNDWTVIGDWELINTGKNDNAGIVKFDSIVIYNYNPILINIKNGRNNLIPDQNTVNAICSDGRIYSKDWKESIYNEETESTSKNLLTIGYSGNTYTKIAFKNLAIYPTVLSKEDCIKAYNYLQTLKSK
- Physico‐chemical
properties -
protein length: 702 AA molecular weight: 78677,13390 Da isoelectric point: 4,92251 aromaticity: 0,12963 hydropathy: -0,35499
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
702
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 75 | 75 | 0,7905 |
| Central domain | 76 | 403 | 329 | 0,8587 |
| C-terminal | 404 | 702 | 298 | 0,2279 |
Note: Constraints were applied during segmentation.
Fixed 10 C-terminal predictions appearing before Central domain
Fixed 10 C-terminal predictions appearing before Central domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-75
1-75
Central
76-403
76-403
C-terminal
404-702
404-702
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
phage csAssE-Sib [NCBI] |
3092639 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WOZ57258.1
[NCBI]
Genbank nucleotide accession
OR575929
[NCBI]
CDS location
range 35139 -> 37247
strand +
strand +
CDS
ATGGGAACCATATCAGATAAGTTAATGAGGATCATAAATACCAAAGAGGACATAAGGCAAGCCCTTATATCCAAAGGGTATGATGTACCTACTTCCATACCTTTTAAAGAGTATGCGAAAATGATATTAGACCTGCCATGTAAAGCAGATTCCTTCCCGGACATAGAAGGTATCGTAGCCAGATATTCCGCTTCTGGTATCACCAATGAACAGATGGCTGCCAATCCCGTATGGGTTGATAAGACGGGAAATGGACATGATTTACAAATGAAAAACTTCTCTTGGAAGGGAATGTCTGGAGTAGGTGGGTATGTAGAAAATTATAATAGATGGACGAAATCTGCCGTTAGAGCAGATATAACTTTTACTGATCATTCCTTTAATGTAACTTCTGTTAAAATCAATCAAGCACAGTTTTATTATCAATCGTCTGGCGGAGAACAGCCTTTTACAGTTCCTTCCGGCACGGTGATTGTAAAAGGTTTAACAGATGGACAAGTATTAGAATACATCTATACAGACATCGAAGGAAGACACGTCTTTACAGTTAAAAATGATGGCATATACACTTTACCAAGTTTTGAATTTATTGCTAAAGGGGCTTATTATGGTTTCCAATTTAATAAAGTCCAAGAATCTTGCAACATTACCATCGAACAACTTCCCCTCTACCCCGGCGCACTCGTCTTTGACGGAGTAGACGATTATGGTGTTTGTGATAACTTCCCTATTCTGACTAAGGAAAAGGGATATACGGTTGTGGCGTTGAGACAGTGGATTTCAATGGGTGAAGGATTATATGGATTAGTATCTAATGTAAAGAATTGGTTCAATGATGGTGCTTTCGTTTTAGAATACAACAGTAATAATGCAACTAATAAGTTTGTTAATAGACCTGTATCTTTCGGAAATGTTAATATAGAGATGGATTTGCCAAATAATTTTACCTATCAAACATCTAAAAGTTATAAAGGAGTACCTATAACAACAGGTTCTTTTAAAGGGACAAACTCGCTTTTTGTTGGAAAATTAAATAACATCATTGGAAATTGTTCTAATGTCGCTATCTGGGAACTTGTATTTCTCGATCACGATGCCACCGAAGAAGAGCTGACCAAGATCAAAGACTACTTCGTCAAAACCTATCCCTGGCTCTTTCCCGACCAGGCATGGACAGTGGTAGGCAAAACCAACGAGGACGAAGATCGTGCTACTATTGCCAACATTACGGGCAATGGTAATAATCTTGTGCTGTCGAATTCTGGGTTTGCAGAAGGGAGTGGGTATGGGTTGTATGCTGAGAATTATGCTGGTGGTAGATGGGTTCAATCTACTGATAGAGCGGATTTAACTTGGACGAGTTATTCTGTAAATATAACTTCAGTTAAAGTTGCGTCTACACAGTTATATTATCAATCCTATCCTGAACAACCTTCTTTTATAGTTCCTTCTTATAAGATAAAAGTTTATGGACTGAAAGATGGTCAAACCCTATCTTATAGACAAGCAACTTCTGAAGGGCAACAATTATATAAAATATCAGAAGATGGAACTTATACATTACCGTCTTTTCCATTTAAAGCAAATGGAGATTGGTATGGATTTACCTTAAATAAGGTACAAGAATCCTGTGACATTACTATAGAGCAAATCCCCGAATACGAAGGATATCTGGTTACTGATGGGGTGGATGATAAGATAACTTCGTCTACATTTGAAATGGGTAATGATTGGACTGTAATAGGAGATTGGGAGCTTATAAATACAGGGAAAAATGACAATGCTGGTATTGTAAAATTTGATAGTATAGTCATTTATAATTATAATCCAATACTTATTAACATAAAAAATGGTAGAAATAATTTGATTCCCGATCAAAATACCGTTAATGCAATTTGTTCTGATGGCAGGATTTATTCAAAAGACTGGAAAGAATCTATTTATAATGAAGAAACGGAATCTACCAGTAAAAATCTCTTAACTATAGGATATTCAGGTAACACTTATACTAAAATTGCTTTCAAAAACTTAGCGATTTATCCTACAGTCCTTTCCAAGGAAGATTGTATAAAAGCATATAATTATTTACAAACCCTAAAATCAAAGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
f8c5aa13aa362a291b5d940bce3a4c22fff60e040bdccb7a185fbe3022f2faa4
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Genomic features analysis of epsilon crAss-like phages from human gut metagenomes | Tikunov,A.Y., Morozova,V.V., Chechushkov,A.V., Tikunova,N.V. and Babkin,I.V. | 2024-03-27 | — | GenBank |