Protein

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Genbank accession
AVR56924.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MANEGIELEIYHYSDWKTLKGRLPGRKTPAALTELKGVGGGSFSIRRADPKLAKDPTLLKGRNICKVLVDREVVGAFLIGDRSSTIVSSGERSELTYTLGGAGLKQLFDDAIVEAFGGTTQFSGDKRYFNFATERGTWYNTSQWVAPTVYNKWGTGIWAQYPEKWPEVAKNASYWIGPGAYSANMTKGRWYARLEFPIATAGKYAIYSAVDNQFTMYVDGQQKAATKDGGSWKDTAKVEVDFTAGNHIIAYEVDNFDGPTALLMAVTLVVDKDNEILNTSSNSGPGWKVLPFPAKAPGWSPGEVLGDLIAEANARGVLFPSVLTKTFTDTVDSNGIPWPADTFIDWDFTVGESMLSVVNKLEESTVDIWIDPKDYKLYMIPQRGVDRTVFTFSGQTATATPIEFKLGKHLREASTKSKAKIKNALLLKTVDGFISLENGPSKNIYGRLETIVDTGVSASLAADIAMGIFAQRAKEEEGASYNLLTREYIPFVHFNVGDLVLAPNEFGESVPRRVMSISVTESDAGQPLYTIEFDIIFRDNDDRINKALDKLGMGGVGSTSPNTGGSTPGVGQPVIFPPSTPDPTQNLRTPKAPTDLVVTSEGAWSPNGVTPIGIVNLDWTAVTQDVNDAAITPNWYNVEGQLFEPFIDGDGNTSYEALVGPEDFGRVTESEMSLQPFEPGSVWKFRVRAGDDGAWSDWTPEVQHIPEGPSTPMPPPNPPVVTSHRGTMSVAWDGMMGDFQPPPQFRYVYAEVSAAETGPWQRVSTVLFRNGGTIPIPQFSVGTALWVHLIAVDGVGIESAASSPVQHTITGISGPDIEANSVDANRLIAGSIKTNHLSPEVGSQLNIEGNVTIVATKNQINGVAGDLDDTNDNLAEMQTYYDFGPTGAVISSPGSVFATAVRSDRIEMLENGNVISYWNSGQMYVNQLIGQRVTLGRHQIEQFDANGTVVRAL
Physico‐chemical
properties
protein length:953 AA
molecular weight: 103391,68420 Da
isoelectric point:4,81218
aromaticity:0,09549
hydropathy:-0,24627

Domains

Domains [InterPro]
DC_2220
ATT
230–609
DC_2220 IPR003961
DC_0412
RBD
590–950
DC_0412
AVR56924.1
1 953
Architecture
ATT
RBD
STR
RBD
ATT 230-609 | RBD 610-713 | STR 714-816 | RBD 817-950 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVR56924.1
1 953
Domain Start End Length (AA) Confidence
N-terminal 1 273 273 0,5841
Central domain 274 472 200 0,1551
C-terminal 473 953 480 0,0223
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-273
Central
274-472
C-terminal
473-953

Taxonomy

  Name Taxonomy ID Lineage
Phage Microbacterium phage Triscuit
[NCBI] 		2126721 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVR56924.1 [NCBI]
Genbank nucleotide accession
MH047631 [NCBI]
CDS location
range 29583 -> 32444
strand +
CDS
ATGGCTAACGAAGGCATCGAGCTGGAGATCTATCACTACAGCGACTGGAAGACACTCAAGGGTCGTCTGCCTGGCCGCAAGACTCCCGCTGCCCTCACCGAACTTAAGGGTGTCGGAGGTGGGTCGTTTTCGATTCGTCGGGCAGATCCGAAGCTCGCCAAAGACCCGACGCTGCTCAAGGGTCGCAACATCTGCAAGGTGCTCGTCGATAGGGAAGTCGTAGGGGCCTTCCTGATCGGTGATCGATCATCGACGATTGTGAGCAGTGGGGAGCGATCTGAGCTTACCTATACGCTCGGAGGAGCAGGCCTGAAGCAGCTATTCGATGACGCGATCGTCGAAGCATTCGGGGGAACGACTCAGTTCTCGGGTGACAAGCGCTATTTCAACTTCGCCACTGAGCGAGGGACCTGGTACAACACTTCGCAGTGGGTCGCTCCCACGGTGTACAACAAGTGGGGCACGGGCATCTGGGCTCAGTACCCCGAGAAATGGCCCGAGGTTGCCAAGAATGCCTCGTACTGGATCGGTCCTGGCGCGTACAGCGCAAACATGACCAAGGGTCGCTGGTACGCTCGACTCGAGTTCCCCATCGCTACCGCTGGCAAGTACGCGATCTATTCGGCAGTTGACAACCAGTTCACGATGTACGTCGATGGTCAGCAGAAGGCAGCAACCAAGGATGGCGGAAGCTGGAAGGACACGGCTAAGGTCGAGGTCGATTTCACTGCGGGCAATCACATCATCGCCTACGAGGTTGACAACTTCGATGGTCCGACGGCTCTGCTCATGGCGGTCACGCTGGTGGTCGACAAGGACAATGAAATCCTCAACACGAGTTCGAACAGCGGTCCCGGCTGGAAGGTACTGCCCTTTCCCGCTAAGGCGCCTGGCTGGTCGCCCGGTGAGGTGCTGGGTGATCTGATCGCCGAGGCGAACGCACGAGGAGTCCTCTTTCCCTCGGTGCTGACCAAGACGTTCACCGACACCGTCGACTCGAACGGGATTCCCTGGCCTGCCGATACGTTCATCGACTGGGACTTCACCGTAGGCGAATCGATGCTCTCAGTGGTGAACAAGCTCGAGGAATCGACGGTCGACATTTGGATCGATCCCAAGGATTACAAGCTCTACATGATCCCTCAGCGGGGTGTGGATCGAACTGTCTTCACCTTCTCGGGACAGACAGCCACTGCTACTCCCATCGAGTTCAAGCTGGGCAAGCATCTGCGCGAGGCAAGCACCAAGTCGAAGGCGAAGATCAAGAACGCCCTGCTGCTGAAGACGGTTGATGGATTCATCTCCCTTGAGAACGGTCCGTCGAAGAACATCTATGGTCGACTTGAGACGATCGTTGACACGGGAGTTTCGGCATCGCTTGCCGCGGACATCGCCATGGGCATCTTCGCTCAGCGAGCCAAGGAGGAAGAGGGAGCGAGCTACAATCTCCTGACTCGAGAGTACATCCCATTCGTTCACTTCAACGTGGGCGATCTGGTCCTGGCTCCCAATGAGTTCGGCGAATCAGTACCTCGTCGAGTGATGTCAATCTCTGTCACTGAGAGTGATGCAGGACAGCCCCTCTACACCATCGAGTTCGATATCATCTTCCGTGATAACGACGATCGAATCAACAAGGCGCTCGATAAGCTGGGTATGGGCGGAGTGGGTAGCACGTCCCCGAATACGGGAGGGTCCACACCAGGGGTTGGTCAGCCTGTCATCTTCCCGCCGAGCACGCCTGATCCCACTCAGAACCTGCGCACTCCCAAGGCACCAACTGACCTGGTCGTGACCTCTGAGGGTGCCTGGTCGCCCAACGGAGTGACACCCATCGGCATCGTCAACCTCGACTGGACTGCAGTGACGCAGGATGTCAACGATGCGGCGATCACTCCCAACTGGTACAATGTCGAGGGTCAGCTCTTCGAACCGTTCATCGATGGCGATGGCAATACTTCGTACGAGGCCCTGGTCGGACCTGAGGATTTCGGCCGGGTGACCGAAAGCGAGATGTCGCTGCAGCCGTTCGAGCCGGGTTCGGTTTGGAAGTTCCGGGTTCGTGCCGGCGATGATGGCGCATGGAGTGACTGGACTCCCGAGGTTCAGCACATCCCCGAAGGCCCTTCAACCCCGATGCCGCCTCCCAACCCTCCGGTAGTGACCTCTCATCGAGGCACGATGTCGGTGGCCTGGGATGGCATGATGGGCGACTTCCAGCCTCCACCTCAGTTCCGATATGTCTACGCTGAGGTCTCGGCTGCAGAGACTGGCCCCTGGCAGCGGGTCAGCACGGTTCTCTTCCGCAATGGCGGTACGATCCCGATCCCTCAGTTCTCGGTCGGCACCGCGCTCTGGGTTCACCTGATCGCCGTCGATGGTGTGGGAATCGAATCTGCTGCCTCTAGCCCGGTACAGCACACCATCACAGGTATTTCGGGTCCGGACATCGAAGCCAATTCGGTCGATGCCAACCGACTGATCGCGGGATCGATCAAGACGAACCACCTCTCGCCTGAGGTTGGCTCTCAGCTGAACATCGAAGGTAACGTTACCATCGTTGCCACGAAGAATCAGATTAATGGGGTCGCTGGAGATCTGGATGACACCAATGATAACCTCGCCGAGATGCAGACCTACTACGATTTCGGTCCAACAGGTGCAGTCATTTCGAGCCCAGGGTCGGTTTTTGCGACGGCCGTCCGAAGTGATAGGATCGAGATGTTGGAGAACGGGAACGTGATCTCCTACTGGAACTCCGGCCAGATGTACGTTAACCAGCTCATCGGCCAGCGAGTGACACTCGGTCGACATCAGATCGAGCAATTCGACGCTAACGGAACGGTGGTGAGGGCTCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
78baef39cb12d0a0a5fe46f0fd3f0c05f1b7f7fb0210eed8c4da8e43f151f717
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2944
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50