Protein

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Genbank accession
QBX32628.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSKQYVLQQMLFSIMADGVHELVFQKADGSHRMMDATRDPNLIEVSKRGPDAFSPATDTGEQKERKESNVLNVVVYDLTAKDWRSFRIDRLVSINGTGIGTLAGLVGCDRGRFEMGVTYDRYIHSSKAEYIDADQKDPDFISDLIENSETLKLVSEKYGVSTWFLAEDTEF
Physico‐chemical
properties
protein length:171 AA
molecular weight: 19329,47030 Da
isoelectric point:4,81167
aromaticity:0,09357
hydropathy:-0,43158

Domains

Domains [InterPro]
IPR024401
STR
13–92
IPR024401 DC_0553
IPR024401
STR
13–100
IPR024401
QBX32628.1
1 171
Architecture
STR
RBD
STR 13-100 | RBD 101-171
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Asfd_1
[NCBI] 		2562462 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX32628.1 [NCBI]
Genbank nucleotide accession
MK577502.1 [NCBI]
CDS location
range 947 -> 1462
strand -
CDS
ATGTCGAAACAATATGTACTACAGCAAATGCTTTTCTCCATCATGGCTGATGGTGTACATGAGCTGGTTTTCCAGAAAGCAGATGGTTCTCATCGTATGATGGATGCCACCCGTGACCCAAACCTGATTGAGGTTTCCAAACGCGGCCCTGACGCATTCTCCCCGGCAACAGACACAGGCGAACAAAAAGAACGCAAAGAATCCAACGTTCTGAACGTTGTGGTTTATGATCTGACGGCAAAAGATTGGCGCTCTTTTCGAATTGACCGACTGGTGTCGATTAATGGTACCGGAATTGGCACACTAGCCGGTCTGGTCGGATGCGACCGTGGTCGTTTTGAAATGGGTGTCACTTATGACCGGTATATTCACAGCAGCAAAGCTGAATATATCGATGCTGACCAAAAAGACCCAGATTTCATTTCCGACCTGATTGAAAATTCTGAAACACTGAAGCTCGTTTCCGAAAAATATGGTGTCAGCACTTGGTTCCTGGCTGAAGACACCGAGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ce8dcd1ba6e70fac24a87d9e716ba4a254ff83b5fa491f7160c9ef2ad84f0cc0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6380
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a novel lytic T4-like bacteriophage Asfd-1 combating Aeromonas Salmonicida Zhou,Y., Yuan,S. and Ma,Y. 2010-12 — GenBank