Protein

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Genbank accession
WNM55355.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTEGTYKVRGIKLPSNSILSGEGKGVTTIKMNDDAPQENLVVTNRDVDGTAKNITVKDFSINGNKFRQEGTLKAAGGSRSSNLRYAGVTNGYIYNIESYDALLHGIDVTYASDDYFYEGDNVRVEEQLESNFIHIDNCETYGFGDDGITTHHSKFLNITNNYSHHPTGGGNNNGIEIDDGSRYVMLSGNTTKQNFGGLEIKAHGTATAPSGVFVNNHLSIEDTRSYNVRHIGHHRAATDVKSKSAHDVVLNNITSIYPYANNTYENVTPRALVISAYDGVVCNNVTCIGDGRFQAGQPAIAVQFMSQNIVISNSEHHRLQKRYGRHESIRWQ
Physico‐chemical
properties
protein length:332 AA
molecular weight: 36571,80040 Da
isoelectric point:6,19104
aromaticity:0,08434
hydropathy:-0,56747

Domains

Domains [InterPro]
IPR012334
STR
2–327
IPR012334
IPR011050
STR
3–286
IPR011050
IPR006626
Unmapped
51–87
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
WNM55355.1
1 332
Architecture
STR
STR 2-327 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNM55355.1
1 332
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1377
Central domain 11 320 311 0,9948
C-terminal 321 332 11 0,8732
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-320
C-terminal
321-332

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage S-CoN_Ph27
[NCBI] 		3076584 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus sp.
[NCBI] 		29387 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNM55355.1 [NCBI]
Genbank nucleotide accession
OR354850 [NCBI]
CDS location
range 37815 -> 38813
strand +
CDS
ATGACTGAAGGTACTTATAAAGTAAGAGGTATTAAATTGCCTAGTAACTCAATTTTGAGTGGGGAAGGCAAAGGCGTTACAACTATTAAAATGAATGATGACGCCCCTCAAGAAAATCTTGTCGTTACAAATAGAGATGTAGACGGTACAGCTAAAAACATCACTGTTAAAGACTTTAGTATCAATGGTAATAAGTTCAGACAAGAAGGCACATTAAAAGCTGCTGGCGGCTCACGTTCAAGTAACTTACGCTATGCAGGTGTTACTAATGGATATATTTATAACATCGAAAGTTATGACGCACTATTACATGGTATAGACGTTACATACGCGTCTGATGATTACTTCTATGAAGGAGATAACGTACGTGTTGAGGAGCAATTAGAAAGTAACTTCATTCATATCGACAACTGCGAAACGTACGGTTTCGGAGACGACGGTATTACAACACACCACTCTAAATTCTTAAATATCACAAACAACTATTCACACCACCCTACAGGTGGAGGTAATAATAACGGTATCGAAATAGATGACGGTTCAAGATATGTGATGTTAAGTGGTAATACAACAAAACAAAACTTTGGCGGGCTTGAAATCAAAGCGCATGGTACAGCTACAGCGCCAAGTGGCGTGTTCGTTAATAACCATTTATCTATTGAAGATACAAGAAGTTACAACGTAAGACATATAGGACATCACAGAGCCGCAACAGATGTTAAAAGTAAATCGGCTCATGACGTTGTACTTAATAACATTACATCTATTTATCCATATGCAAACAATACATATGAAAATGTTACGCCTAGAGCGTTAGTTATTAGTGCTTATGACGGTGTCGTATGTAACAACGTAACATGCATAGGCGACGGACGTTTCCAAGCAGGCCAACCAGCAATAGCAGTTCAATTTATGAGCCAAAACATTGTCATTAGTAACAGTGAACATCACAGGCTTCAAAAACGCTATGGCAGACATGAAAGTATTCGGTGGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a1143adf68ea9ebb3c8ec8bd117232fd3d4b6deee3acc6d604e5a975e03d3844
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8335
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50