Protein

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Genbank accession
UYE97071.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MRYIGLDPYRNTVVQIDGNKSQYINVRSFGATGLDRYFTGSVSGVNSSGTSIYFNGISDFYEYENDYFIIGRRITAFFYENTSTPSAALYNFIFTNPDSTPVGAIHDSTGAAGSEVKYFVYPFNPQTGVLSPYGSEITQNNIVSDPDTTFDEQNYIQFTLQRSSNQYLPLIFRRYNGVLKFLGIPGNNAVGTGSTITFQDRGAIQIASWDEDYVAGNSRFFIPDFLSDQISYAANDAGPTIKVVTGKRTLEIKYKNEITGALELVDAFNNQADLSPLFGGSTTVKFKFDDTKAIQDAIDYGKDFIIKDIFFPSGTYNVGHVELYNENGTNNAYDGISLRGVGTSSIIKRGPSFINTQDKYGSIGIMGNPSDRVTGISFSNLAFDGNKTETFATKNPANDIYGISSKYQDMLALEHVDLLTVDNCSFYNGAGTGIYSIDSEKLNLTNCKIFQMSKPYEPNIPPLKIRETDKVIAQGNLFENCTGVADFTGIDVSVINNNIVNNCGDTGLLLRASDNWNATGNLTFNSSGSVIQSVDLYQNDYSRASIAIKKGTPMAPYYFTVTEGQLPVDIAVGTLEAKVYALNANYTISNVNSPTTYLKVIESVDQLRAGIFGVTAPIANIAAGDNTINGDANAGHAILGTSNYNLIDVDGSNPHYGYSYRITGKVRLGDFPIKQIKAISSTQIKLFFETTSDFLKFLFFVGGAGGSNDKIISFGIADSNNDLASWNDQNVEYSILGTTAADSTLTLAIPSDVSDAFPNGNETLVTRGASVKIVRDNYFIADGNVYVSD
Physico‐chemical
properties
protein length:789 AA
molecular weight: 85882,25860 Da
isoelectric point:4,65400
aromaticity:0,11787
hydropathy:-0,19404

Domains

Domains [InterPro]
IPR012334
STR
280–653
IPR012334
IPR012334
STR
285–653
IPR012334
IPR011050
STR
288–653
IPR011050
UYE97071.1
1 789
Architecture
STR
STR 280-653 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE97071.1
1 789
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,8344
Central domain 288 698 412 0,9745
C-terminal 699 789 90 0,4063
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-698
C-terminal
699-789

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM61
[NCBI] 		2969441 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CC9605
[NCBI] 		110662 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE97071.1 [NCBI]
Genbank nucleotide accession
OP053361.1 [NCBI]
CDS location
range 83059 -> 85428
strand +
CDS
ATGAGGTATATTGGTCTAGACCCTTATAGAAATACAGTAGTCCAAATTGATGGGAACAAAAGTCAGTACATTAACGTAAGATCTTTTGGAGCAACAGGACTCGATCGCTATTTTACCGGCTCGGTCTCCGGTGTTAATTCTTCAGGAACCTCTATTTACTTTAATGGAATTTCTGATTTTTACGAGTATGAAAACGACTATTTTATAATCGGTAGAAGGATTACTGCATTTTTCTACGAAAATACTTCTACGCCATCGGCGGCGTTGTATAATTTTATCTTCACAAACCCAGACTCAACTCCAGTAGGTGCAATCCACGATAGCACAGGAGCGGCGGGCTCAGAAGTTAAATATTTTGTATATCCTTTCAACCCACAAACAGGAGTTCTATCTCCCTATGGATCAGAGATTACTCAAAATAATATTGTATCTGACCCAGACACTACTTTTGACGAGCAAAATTATATTCAGTTTACCCTTCAAAGATCTAGCAACCAGTACCTACCTTTAATTTTTAGAAGATACAATGGCGTACTTAAATTCCTTGGAATACCAGGAAATAACGCGGTAGGAACAGGGTCTACAATTACCTTCCAAGATAGAGGGGCTATTCAAATTGCTTCTTGGGACGAAGACTATGTTGCAGGTAATTCTAGATTCTTTATTCCAGATTTCTTAAGCGATCAAATTTCTTATGCTGCTAACGATGCTGGACCTACTATTAAAGTAGTAACAGGAAAAAGAACTTTAGAGATCAAATATAAAAACGAGATTACAGGAGCTCTTGAACTCGTAGATGCATTTAACAACCAGGCAGATCTTTCTCCGCTGTTTGGAGGGAGCACTACAGTTAAATTCAAGTTTGACGATACAAAGGCCATCCAAGATGCAATTGATTACGGAAAAGACTTTATTATCAAAGATATTTTCTTCCCATCTGGAACTTATAACGTTGGCCACGTCGAATTATATAACGAAAACGGAACAAACAACGCGTACGATGGCATTTCTTTAAGAGGAGTTGGTACATCTTCGATTATTAAAAGAGGACCTTCGTTTATTAACACTCAAGACAAGTATGGCTCGATAGGTATTATGGGTAATCCTAGCGATAGAGTTACCGGTATTAGCTTTAGTAATCTTGCTTTTGATGGTAATAAAACAGAAACATTTGCCACAAAGAACCCAGCAAACGACATCTATGGAATTTCTAGTAAGTACCAAGACATGCTTGCTTTAGAACACGTAGATTTGCTTACTGTAGATAATTGCTCGTTCTATAATGGAGCCGGCACCGGAATTTATTCTATAGACTCTGAAAAACTAAATCTTACAAACTGTAAGATATTCCAGATGTCTAAGCCTTACGAACCTAACATTCCTCCTCTTAAGATTAGAGAAACTGACAAAGTTATTGCGCAAGGCAACCTATTTGAAAACTGCACCGGTGTTGCAGACTTTACTGGTATTGATGTCTCGGTAATTAACAACAATATCGTTAATAATTGTGGCGATACTGGATTACTACTAAGAGCTTCTGATAACTGGAATGCCACTGGCAACCTAACCTTTAACTCCTCTGGAAGCGTTATTCAGTCTGTTGATCTATATCAAAACGATTACAGCAGAGCTTCTATTGCCATTAAGAAGGGTACTCCTATGGCACCTTACTACTTCACAGTAACCGAAGGCCAGCTTCCTGTAGATATTGCTGTTGGAACTTTGGAAGCAAAAGTATATGCATTAAATGCAAATTATACTATATCCAATGTAAACTCCCCAACAACGTATCTTAAAGTTATTGAAAGTGTTGATCAGCTAAGAGCCGGTATTTTTGGTGTAACTGCACCTATAGCCAATATTGCTGCAGGAGACAACACTATTAACGGAGACGCAAACGCAGGCCACGCAATTTTAGGCACAAGCAATTACAATTTAATTGATGTTGATGGCTCTAATCCTCACTATGGCTACTCTTACAGAATTACTGGTAAAGTAAGATTAGGAGACTTCCCTATCAAGCAAATCAAGGCAATCTCTTCTACACAAATTAAGCTTTTCTTTGAAACTACTTCTGATTTCCTCAAATTCTTATTCTTTGTAGGAGGAGCCGGTGGTTCTAATGATAAGATTATTAGTTTTGGAATAGCAGATAGTAATAACGATCTTGCTAGCTGGAACGATCAAAACGTTGAATATTCCATACTAGGGACTACTGCAGCTGATTCTACTCTTACCCTTGCAATTCCCTCTGATGTAAGTGACGCGTTCCCCAATGGAAACGAAACCCTTGTAACCAGAGGGGCCTCGGTTAAAATTGTAAGAGATAATTACTTCATTGCTGACGGAAATGTCTACGTATCTGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ab3368eeea6c8aba3106de5349512cdce34fe3d12bc0756694cb0e58731caeb4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4681
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank