Protein

View in Explore
Genbank accession
AXK90450.1 [GenBank]
Protein name
Lambda-like host specificity tail fiber protein J
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MSKKINREKSKGFSGSFGGAKNAASRTQTPVSGRSTSTAYILGALCEGEIEGSIGGVKGVYLDEVPIQNANDSYNFKDYEFHFRPGSQIQNVIDFNTGQRDFAPTATGLPNYNDVPQIFTYNNPDIAITRLFFEVILEAFVPSSSFYIIVGNANRLVFPGIKFRLSYTFNQDDSGWTPYYEEVVGGNDFASSINVTSVEVGVTSDGGSITAIAYYLTSSSTKRTPEISFSTPKTFVKIKIEKLSLGGEIRGIETFRGTAYDYGYPLYDYYLYQPFPEDNAEIIALNNLSNGKHFQVNLNLNKYWGISAGFNKQVSLETPVQVAVKNNLEITRQFTNETVEAIKVKLAFTLQRFDDQGNTFGERVNFRIDVNERGNGFVNKVNSFFEGRYPSPTEVDFLIPVSTAPNSNNNTFQIRVYKDTDESQDANTQREITWVSYTQVTFTTLNYPNTAIAGFKFNTEYFQQIPSVAIKLAGRIIQIPSNATIHTYNSLGQSNNPQTRYLTFNGNWNGNFIPGKNEDQEPTACSDPAWILYDLLTNTRYGLGNYIDTSQIDKWGLYEISKYCNELVSDGSGKSEPRFSCNVKLEGKVEAYQVIQNLVSIFRGFAYWQAGVVSFAADASGSVVHQFTQADIEEGSFTYSRSGLKSRKTVAVVSYLNPLDFYKKAVEVVEDPIGIAKWGVRELEIDAIACSSRGQARRAGVAALLTNRMEQESVTFKARAFAAYVKPGDLIRIYDSKRTAARYAGIIKSATATSVTLDSPVDLATGTAYKITVTTSKLVFPKIEEGANQSDAAQKQKLRFEVKEATITSTGNNLTVLNLQSPGFGADVPPPESNWIIQGGTLSNTIYRVINRSPVQDSIEGMHEILAVEYNSSKYNLIDGMSLL
Physico‐chemical
properties
protein length:884 AA
molecular weight: 97942,30760 Da
isoelectric point:5,59690
aromaticity:0,11652
hydropathy:-0,31278

Domains

Domains [InterPro]
DC_0016
STR
2–882
DC_0016
IPR053171
Unmapped
313–879
IPR053171
IPR055385
ATT
316–441
IPR055385 IPR032876
AXK90450.1
1 884
Architecture
STR
ATT
STR
ATT
STR
STR 2-315 | ATT 316-441 | STR 442-589 | ATT 590-739 | STR 740-882 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXK90450.1
1 884
Domain Start End Length (AA) Confidence
N-terminal 1 252 252 0,9243
Central domain 253 483 232 0,1084
C-terminal 484 884 400 0,0444
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-252
Central
253-483
C-terminal
484-884

Taxonomy

  Name Taxonomy ID Lineage
Phage Cylindrospermopsis raciborskii virus RM-2018a
[NCBI] 		2293728 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXK90450.1 [NCBI]
Genbank nucleotide accession
MH636380.1 [NCBI]
CDS location
range 33689 -> 36343
strand +
CDS
ATGTCCAAAAAAATAAATAGAGAAAAATCTAAAGGATTTTCTGGTAGTTTTGGAGGTGCTAAAAATGCTGCTAGTAGAACTCAAACCCCAGTTAGCGGACGGTCTACTTCTACTGCTTATATTTTAGGTGCTTTATGTGAAGGAGAAATTGAAGGCTCAATTGGCGGGGTAAAAGGTGTCTATTTAGATGAAGTTCCAATCCAAAATGCTAATGACAGCTACAACTTTAAAGACTATGAATTTCACTTTAGACCTGGATCTCAAATACAAAACGTCATAGATTTTAATACAGGACAAAGAGATTTTGCGCCAACTGCAACTGGGCTACCTAACTACAATGATGTTCCACAAATTTTTACTTATAATAATCCAGATATCGCTATAACTCGTTTATTTTTTGAAGTAATTTTAGAGGCATTTGTTCCAAGCAGTTCTTTTTATATTATAGTTGGCAATGCTAATCGTCTGGTTTTTCCTGGAATAAAATTTAGGCTTAGCTACACTTTTAATCAAGATGACTCCGGTTGGACTCCATATTATGAAGAGGTTGTTGGAGGAAACGATTTTGCAAGTTCTATCAACGTAACAAGCGTTGAGGTGGGAGTCACTAGCGATGGCGGTAGTATAACTGCAATAGCATACTATTTAACATCATCGTCTACTAAACGTACTCCGGAAATAAGTTTTAGCACTCCAAAAACATTTGTAAAAATTAAAATAGAAAAACTGTCATTGGGAGGCGAGATTAGAGGTATAGAAACGTTTAGAGGAACTGCTTATGACTACGGATATCCTCTTTATGATTACTATTTATATCAGCCATTTCCAGAGGACAACGCAGAAATAATAGCGCTAAATAATCTTAGCAACGGCAAACACTTTCAAGTAAATCTTAATTTAAATAAATATTGGGGAATCAGTGCTGGATTTAATAAACAAGTATCTCTAGAAACACCAGTACAAGTAGCAGTAAAAAACAACTTAGAAATTACTAGGCAATTTACAAATGAAACTGTAGAAGCTATAAAAGTTAAACTTGCATTTACGTTACAACGCTTTGATGACCAAGGTAACACTTTTGGAGAAAGAGTAAATTTTAGAATTGACGTTAATGAGCGCGGTAATGGATTTGTTAACAAAGTAAATAGTTTTTTTGAAGGAAGATATCCTAGTCCTACAGAAGTAGATTTTTTAATACCTGTTTCAACAGCGCCAAATTCAAATAACAATACTTTTCAGATTAGAGTTTATAAAGATACAGATGAATCTCAAGACGCAAATACTCAGCGAGAAATAACGTGGGTAAGTTATACACAAGTTACGTTTACTACTTTAAATTATCCTAATACTGCTATAGCTGGGTTTAAATTTAATACTGAATATTTTCAACAAATTCCATCAGTTGCTATTAAACTAGCCGGCAGAATAATCCAAATACCATCTAACGCTACGATACATACCTACAATTCTTTAGGACAATCAAATAACCCTCAAACAAGATATTTAACTTTTAATGGCAACTGGAATGGAAACTTTATCCCTGGTAAAAACGAGGATCAAGAACCAACCGCATGTAGTGACCCAGCATGGATATTGTACGATTTATTAACAAACACTAGATACGGATTAGGTAATTATATTGATACTAGTCAGATAGATAAATGGGGTTTATACGAAATTAGTAAATATTGCAACGAATTGGTGTCAGATGGTAGCGGTAAATCTGAGCCACGATTTAGCTGCAATGTTAAGCTAGAAGGCAAAGTAGAAGCGTATCAGGTTATACAAAACTTAGTATCAATATTTAGAGGCTTTGCTTACTGGCAAGCTGGAGTAGTGTCTTTTGCGGCAGATGCTAGTGGTAGCGTAGTGCATCAGTTTACACAAGCAGACATAGAAGAGGGTTCTTTTACCTATAGTAGAAGTGGATTAAAGTCTAGAAAAACTGTAGCAGTAGTAAGTTATCTTAATCCTTTAGATTTTTACAAAAAAGCTGTAGAAGTGGTAGAAGATCCAATTGGAATAGCTAAATGGGGTGTCAGGGAATTAGAAATAGACGCTATAGCATGTAGTTCTAGAGGACAAGCTAGACGAGCAGGTGTTGCAGCACTTTTAACTAATAGAATGGAGCAAGAATCTGTAACTTTTAAAGCTAGAGCCTTTGCAGCCTACGTAAAACCAGGTGACTTAATACGCATATATGATTCTAAAAGAACAGCTGCTAGATATGCGGGCATTATTAAATCTGCAACTGCAACTTCAGTAACATTGGATAGTCCAGTAGATTTAGCAACTGGTACAGCTTATAAAATTACAGTAACAACCAGTAAACTAGTATTCCCAAAAATAGAGGAAGGTGCTAACCAGTCTGACGCTGCACAAAAACAGAAATTAAGATTTGAGGTTAAAGAAGCAACTATTACTAGCACTGGTAATAATTTAACTGTGCTAAACTTACAATCTCCAGGCTTTGGTGCTGATGTTCCGCCACCAGAGTCTAATTGGATAATTCAAGGTGGCACATTGTCTAATACAATTTATAGAGTGATTAACCGGTCTCCAGTGCAAGATTCTATAGAAGGTATGCACGAAATACTAGCGGTAGAGTATAATAGTAGCAAGTATAATTTAATTGATGGAATGAGTTTATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2f98c862387d3aeb0036ffa20f303bd9f1b96d63532033e27a8b0ee04e3814b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7272
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome of the Cyanophage Cylindrospermopsis raciborskii Virus (CrV) Martin,R.M., Moniruzzaman,M., Mucci,N.C., Willis,A., Woodhouse,J.N., Xian,Y., Xiao,C., Brussaard,C.P.D. and Wilhelm,S.W. 2004-06-15 — GenBank