Protein

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Genbank accession
XLZ15564.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,68
Protein sequence
MHINSSIPNLIGGVSQQPELLRLPSHLRVQENGYSTASKGLSKRPSSTHSGTCPSFSGEGYHKTLDFGSRGVFHMEVDNGTGTLRMVKEDGTAVPMYDSEGFLLGSLSYLTTATPETSLKVVQEADTAFIINTDIVVQQKVNPPAASVWMALVWVKAGNYGRDYSVTVPGFGTATYTTPDGSSASHSVNTKTNVIASSLAAQLSNLGIPGVTVSGSVITFIYGGYNGMTVDDGSGGNAMGLAYKSVRSIADLPSSNAANNFTVKIEGGDATGAGDHYLLYDAINRVYKETSNPLEGWPEPFAPTMPVMLQPYQDGFKVSPIQWGGRKVGDADTNPSPTFIGNRITDICFYQDRMVMLAGEDFNISEVGEYFNFYRTTVVDLLDSDPIIGTVSHPKVSTLRHALPFNKRLLFFSDKAQFELASGDFITPKSVATVQLTQFECSSFVRPVGLGNSLYFPVDKGDFSAFYNFFVNGVESLEDAADISGHVAEYIPKNVTQMVASPVNNLVMALSKEDASAIYVYQFYQDGQQRLQSAWHRWPYVASGDILCMDVVGTRLILLVRRSTGSGTVVCSESIPLSADLKGYRLDRKVTLYPQHLSVVGTGLSQATGFMLPYAAGTGTYYAVVVQGSATVKPGTLLKVSTDPGSAACSVRGNLTGCTIQVGLNYTFRATLGRFLLREQAGAGSAGVSRGRTQVARLWVNYADSATFTVEVASEGRGVKSYKATGRVLGTPSATIGEPVLEDGRFGCPVLAENTKVEITLVNDTPLPSSFLSVDWEGYHVSRGQHV
Physico‐chemical
properties
protein length:787 AA
molecular weight: 84493,20030 Da
isoelectric point:5,82858
aromaticity:0,09530
hydropathy:-0,07421

Domains

Domains [InterPro]
IPR058003
TTP
3–786
IPR058003
XLZ15564.1
1 787
Architecture
TTP
TTP 3-786 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLZ15564.1
1 787
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9673
Central domain 143 341 200 0,1678
C-terminal 342 787 445 0,2760
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-341
C-terminal
342-787

Taxonomy

  Name Taxonomy ID Lineage
Phage Limnohabitans phage YIMV22061
[NCBI] 		3390366 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Limnohabitans sp. YIMB22184
[NCBI] 		3374104 Pseudomonadota > Betaproteobacteria > Burkholderiales > Comamonadaceae > Limnohabitans >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLZ15564.1 [NCBI]
Genbank nucleotide accession
PQ492660 [NCBI]
CDS location
range 30150 -> 32513
strand -
CDS
ATGCACATCAACTCCAGCATCCCCAACCTGATCGGCGGGGTGTCCCAGCAACCGGAGCTACTGCGCCTGCCGTCGCACCTCCGGGTGCAGGAGAACGGCTACAGCACGGCCTCCAAGGGACTCTCCAAGCGCCCCTCATCGACCCACTCTGGCACCTGCCCCAGCTTCTCCGGTGAGGGCTACCACAAGACCCTGGACTTCGGCTCGCGGGGTGTCTTCCACATGGAAGTGGACAACGGCACCGGCACCCTGCGGATGGTCAAGGAGGACGGCACCGCTGTCCCCATGTACGACTCCGAAGGGTTCCTCCTGGGCTCCCTGAGCTACCTCACCACGGCCACCCCTGAGACCTCCCTGAAGGTGGTGCAGGAGGCCGATACCGCCTTCATCATCAACACCGACATCGTGGTGCAGCAGAAGGTCAACCCCCCTGCGGCCTCCGTGTGGATGGCCCTGGTGTGGGTCAAGGCGGGCAACTATGGGCGGGACTACTCGGTCACCGTCCCTGGCTTCGGCACGGCCACCTACACGACCCCTGATGGCTCCTCAGCGAGTCACTCGGTCAACACCAAGACCAACGTGATCGCCTCCAGCCTGGCGGCCCAACTCTCAAACCTGGGCATCCCTGGGGTGACGGTCTCCGGCTCGGTCATCACCTTCATCTATGGTGGCTACAACGGCATGACCGTGGATGACGGCTCGGGCGGCAACGCAATGGGCCTGGCCTACAAGTCCGTCCGCAGCATCGCAGACCTCCCATCGAGCAACGCGGCCAACAACTTCACCGTGAAGATCGAGGGCGGTGACGCCACCGGGGCCGGTGACCACTACCTCCTCTACGACGCCATCAACCGCGTCTACAAGGAAACCTCCAACCCGCTGGAGGGGTGGCCCGAACCCTTCGCCCCCACCATGCCGGTGATGCTCCAGCCCTACCAGGACGGCTTCAAGGTGAGCCCGATCCAGTGGGGTGGTCGCAAGGTCGGAGACGCGGACACGAACCCCTCGCCCACCTTCATCGGCAACCGCATCACGGACATCTGCTTCTACCAGGATCGGATGGTCATGCTGGCCGGGGAGGACTTCAACATCTCGGAGGTCGGGGAATACTTCAACTTCTACCGCACCACGGTGGTTGACCTCCTGGACTCCGACCCGATCATCGGCACGGTGTCGCACCCCAAGGTGTCCACGCTCCGTCACGCCCTGCCCTTCAACAAGCGGCTCCTGTTCTTCTCGGACAAGGCTCAGTTTGAACTGGCCTCGGGGGACTTCATCACTCCCAAGTCGGTCGCCACGGTGCAACTGACGCAGTTTGAGTGTTCGTCCTTCGTGCGCCCCGTGGGCCTGGGCAACTCCCTGTACTTCCCCGTGGACAAGGGCGACTTCTCGGCCTTCTACAACTTCTTCGTGAACGGGGTGGAAAGCCTGGAGGATGCCGCCGACATCTCAGGCCATGTGGCCGAGTACATCCCGAAGAACGTCACGCAGATGGTGGCCTCCCCGGTGAACAACCTGGTGATGGCCTTGAGCAAGGAGGACGCCTCCGCGATCTACGTCTACCAGTTCTACCAGGACGGCCAGCAACGCCTTCAAAGCGCCTGGCACCGCTGGCCCTACGTGGCCTCCGGGGACATCCTGTGCATGGACGTGGTGGGCACCCGCCTGATCCTCCTGGTGCGCCGCAGTACCGGCTCCGGCACCGTGGTGTGCAGCGAGTCGATTCCCCTCAGCGCCGACCTCAAGGGTTACCGCCTGGATCGCAAGGTCACTCTGTACCCGCAGCACCTCTCGGTGGTCGGCACCGGCCTCTCTCAGGCCACCGGCTTCATGCTGCCCTACGCGGCTGGCACCGGCACCTACTACGCGGTGGTGGTGCAGGGCTCGGCCACGGTCAAGCCTGGCACCCTGCTGAAGGTGTCCACCGATCCCGGCTCCGCCGCGTGTTCCGTGCGTGGCAACCTCACCGGCTGCACCATCCAGGTGGGCCTGAACTACACCTTCCGGGCAACGCTCGGTCGCTTCCTGCTGCGCGAGCAGGCCGGTGCGGGCTCCGCTGGGGTATCCCGTGGGCGCACCCAAGTGGCCCGCCTGTGGGTGAACTACGCGGACTCCGCCACCTTCACCGTGGAGGTGGCCTCAGAGGGTCGCGGGGTGAAGTCCTACAAGGCCACCGGGCGAGTGCTGGGAACCCCATCGGCCACCATCGGTGAGCCCGTGCTGGAGGATGGCCGCTTCGGCTGTCCCGTCCTGGCGGAGAACACCAAGGTGGAGATCACCCTGGTCAACGACACCCCGCTGCCGTCCTCCTTCCTCAGTGTGGATTGGGAGGGCTACCACGTCTCAAGGGGGCAGCATGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
336e0fc2c1a573418bb7fddf7767ca34f3168cd5be14a8b284f06cbd327df667
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3144
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50