Protein

View in Explore
Genbank accession
QNI21190.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,69
Protein sequence
MTILATISPGSITIPAGDSFGPDSVRQKVVDVSAEDTMTNWALNDWSSASDARVYFQQAHCSTDEGMWQHTRLKWTGDAGLRIFYWDETKTKRMSINLQRGSCYGASIGGGSGSTVTFTPFDLNKWIDIDIEFKKTDGWRLFADGTQIASGDFAWPADCNLLSCTFAIPTNLNLTEGVISTTDTRGWRIQSEAPASMVLNGFAGDIAELQTLAPDQGGVSSTGVGSTAKFDFTAVPTDMNIAAVNFSTISDTSGATDSPYLAQILEENGNRHFVGFIAVTADSEDNPTTFVSDVNPTDGSVWTPAVINASTLSVENVHYQAFSSAAVSGGYGLDSGGADWTGGTTMSIKVDSGARTVRVFNKGDDTVKYGTADDLYLWLWLDDLSKEFKGKVTWDGNGYVAATDDTNYNMVISAGINMAMTFVAL
Physico‐chemical
properties
protein length:425 AA
molecular weight: 45568,85700 Da
isoelectric point:4,30467
aromaticity:0,10353
hydropathy:-0,15035

Domains

Domains [InterPro]
IPR013320
STR
65–190
IPR013320
IPR013320
STR
77–184
IPR013320
QNI21190.1
1 425
Architecture
STR
STR 65-190 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_pir03
[NCBI] 		2762667 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNI21190.1 [NCBI]
Genbank nucleotide accession
MT811961 [NCBI]
CDS location
range 214545 -> 215822
strand -
CDS
ATGACTATTCTAGCAACAATTAGTCCGGGTTCAATCACGATTCCTGCTGGCGATTCGTTCGGACCAGATTCGGTTCGTCAAAAAGTGGTAGATGTATCCGCAGAGGATACGATGACTAACTGGGCATTAAACGACTGGTCAAGTGCTAGTGATGCCCGTGTGTACTTCCAACAAGCTCACTGTTCTACTGACGAAGGTATGTGGCAACACACTCGTCTCAAGTGGACTGGCGACGCTGGTCTGCGTATCTTCTACTGGGATGAAACAAAGACTAAGCGCATGTCCATTAACTTACAGCGTGGCTCTTGTTACGGCGCAAGTATTGGTGGTGGCTCTGGCTCAACAGTTACCTTTACTCCATTCGATCTTAATAAATGGATCGACATCGATATCGAGTTTAAGAAGACTGATGGTTGGCGTCTTTTCGCAGATGGTACACAGATCGCATCTGGCGATTTCGCATGGCCTGCTGACTGTAACCTATTGAGTTGCACATTTGCAATTCCGACTAACCTGAACCTCACCGAGGGTGTTATTTCAACAACAGACACTCGTGGTTGGCGTATCCAATCAGAAGCACCTGCTTCTATGGTTCTGAATGGTTTTGCTGGTGATATTGCTGAGCTGCAAACTTTGGCTCCAGACCAAGGTGGTGTAAGTTCCACAGGTGTCGGCTCAACTGCGAAGTTTGACTTTACCGCTGTACCTACCGATATGAATATTGCGGCTGTTAACTTTTCTACAATCAGTGATACGTCTGGTGCTACTGATTCGCCTTATCTTGCACAGATCTTGGAAGAGAATGGCAATCGCCACTTCGTTGGCTTTATTGCGGTTACTGCTGACTCAGAAGACAATCCAACAACGTTTGTTTCTGATGTAAACCCGACCGATGGTTCCGTCTGGACACCTGCGGTGATCAATGCCTCTACTCTTTCAGTCGAGAATGTACACTATCAAGCTTTCTCTTCTGCGGCAGTAAGCGGAGGTTATGGTCTTGACTCAGGCGGCGCAGACTGGACGGGTGGCACCACGATGAGTATCAAGGTTGACTCAGGTGCACGTACCGTACGAGTTTTCAATAAAGGCGACGATACTGTCAAATACGGAACGGCCGATGATCTTTACCTATGGCTTTGGTTGGACGACTTATCTAAAGAGTTCAAAGGCAAAGTAACATGGGATGGAAACGGCTATGTGGCCGCTACGGATGATACCAACTACAATATGGTTATTTCCGCCGGCATCAACATGGCAATGACATTTGTTGCACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d90993f3223ad2f0b200a8885c2d2c5d3c9b2d32eb815c0574eed75093292439
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4167
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biological and genomic characterization of a novel jumbo bacteriophage, vB_pir03 with broad host lytic activity against Vibrio harveyi N Misol,G. Jr., Katharios,P. and Kokkari,K. 2020-12-15 — GenBank