Protein

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Genbank accession
XYR95374.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAIGANDYTDQANTFGVRGPNSTGLYVGTHFDGSGGGADLVSRGYVTEMGDFRFIAVNGSYASPTTRMVIDPSGRVGIGTTSPSNTLEISKEANHGITLARPAEGVNPGNFKLEVSSNGAGVITADNNLSLETGSSQQFIVSRGATESFRVDSNSRLLVGTSSARTVGTVGTAAMLSQIESTGGDAGFSIIRNSNGATAGSIVLAKSRGTANGSSTVVQDDDDLGYIHFNGADGSDVISVAARISAHVDGTPGANDMPGRLVFSTTADGASSPTERMRITSGGEVWFNTTTGTIDSSNHGAKIQNNGVVRLSGNTNASQVTLQVFGTLGEFKVLGDGDCENTNNSYGAISDIKLKENIVDANSQWSDIKALQVRNYNLKPEIGYSTHTQIGLVAQEVELVSPGLVSESPDRDEEGNDLGTVTKSVNYSVLYMKAVKALQEAMERIETLEAKVAALEAN
Physico‐chemical
properties
protein length:458 AA
molecular weight: 47658,81370 Da
isoelectric point:4,76035
aromaticity:0,05459
hydropathy:-0,24847

Domains

Domains [InterPro]
DC_1386
STR
2–215
DC_1386 IPR030392 Coil
DC_1367
RBD
170–458
DC_1367
IPR030392
CHP
350–452
IPR030392
XYR95374.1
1 458
Architecture
STR
RBD
STR 2-215 | RBD 216-458
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR95374.1
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0024
Central domain 11 209 200 0,1050
C-terminal 210 458 248 0,9587
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage 7B11-B
[NCBI] 		3412545 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR95374.1 [NCBI]
Genbank nucleotide accession
PV261922.1 [NCBI]
CDS location
range 4789 -> 6165
strand -
CDS
GTGGCGATAGGAGCCAATGATTACACAGACCAGGCAAACACATTTGGCGTAAGGGGTCCAAACTCTACTGGTCTATATGTCGGAACGCATTTTGACGGATCTGGCGGAGGCGCTGATCTTGTCTCTCGTGGTTATGTAACCGAGATGGGCGACTTCCGCTTTATTGCTGTGAATGGTTCATACGCTTCACCTACCACACGAATGGTTATTGACCCCTCAGGCCGTGTAGGGATTGGCACTACGAGTCCTAGCAATACATTAGAAATCTCCAAAGAAGCCAACCACGGCATCACTCTTGCAAGACCGGCTGAAGGAGTAAATCCTGGAAATTTCAAATTAGAAGTAAGCAGTAACGGCGCTGGAGTCATAACCGCGGATAATAATCTTTCTCTTGAGACAGGATCATCTCAGCAATTCATTGTATCTAGGGGCGCGACTGAATCTTTCAGAGTTGATAGTAATTCCAGGCTGTTAGTTGGCACTTCATCTGCGCGTACCGTTGGCACTGTCGGTACAGCCGCTATGCTCTCACAGATTGAATCTACAGGGGGCGATGCAGGGTTTTCTATCATACGTAACTCTAACGGAGCTACCGCTGGATCAATTGTTCTCGCCAAAAGCAGAGGCACGGCCAACGGATCTTCTACTGTTGTTCAAGATGATGATGACCTTGGTTATATCCACTTTAATGGCGCAGATGGCTCAGATGTAATAAGTGTTGCTGCGCGCATTTCGGCTCACGTAGACGGCACTCCCGGCGCTAACGACATGCCAGGCCGCTTAGTGTTCTCCACTACTGCGGATGGGGCGAGTTCTCCGACGGAGCGGATGAGGATTACGAGTGGTGGTGAGGTGTGGTTTAATACGACAACTGGGACAATAGATAGCTCAAATCATGGTGCAAAGATACAAAACAATGGGGTTGTTCGGCTTTCTGGAAATACCAACGCCAGTCAAGTTACTCTGCAGGTTTTTGGAACCTTGGGCGAATTCAAGGTTCTTGGTGATGGGGACTGCGAAAACACCAACAACTCCTACGGCGCCATCTCCGATATCAAGCTGAAGGAGAACATCGTTGATGCCAACTCCCAGTGGTCAGATATCAAAGCCCTTCAGGTCCGCAACTACAACCTTAAGCCTGAGATTGGTTATAGCACCCACACCCAAATCGGTCTCGTTGCCCAAGAAGTTGAACTTGTCTCCCCTGGTCTCGTCTCCGAATCTCCCGACCGCGACGAAGAAGGCAACGACCTTGGCACCGTTACTAAATCGGTGAACTACTCGGTGCTTTACATGAAAGCCGTCAAGGCGCTGCAGGAAGCAATGGAGCGCATCGAAACCCTTGAGGCCAAAGTTGCTGCACTCGAAGCCAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d75757740e05c8b8db146819edf59d12b9c70476726a0085041008295acd17a7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7607
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50