Protein

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Genbank accession
WYA87448.1 [GenBank]
Protein name
membrane protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQGILIDLNDGRPAMEITAGLRAPAVTGSINTNGLSTPASSWDFGLIMSPGSTAFCLPTKAVHVDAYDVVPEVYYMNGFQKVNDGTGRITLSNFNGAKGRIIDFTGNCFEILPASSSSSPGILVENSTDFLAISSNSRLMSAAWVGGIQVNGSASLPVSGIPFGKWDNPNVSLESDGSTIWCRDITYGGTDDVAASTYVQLVIFRNEPPPAGPGLTMSNSSGQIVFSSVRRPFVLGGFIQINNGYQSINGGFFPLLRCGATTRVTGGYNNLRYKGVCMSGGSVRAVPGSVIGNYSTQTGAQFPFDTNISMALPFIPNFY
Physico‐chemical
properties
protein length:320 AA
molecular weight: 33751,69110 Da
isoelectric point:5,39461
aromaticity:0,10000
hydropathy:0,05844

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
WYA87448.1
1 320
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYA87448.1
1 320
Domain Start End Length (AA) Confidence
N-terminal 1 85 85 0,1698
Central domain 86 284 200 0,0258
C-terminal 285 320 35 0,9870
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-85
Central
86-284
C-terminal
285-320

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PsgS01F
[NCBI] 		3122168 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas syringae pv. garcae
[NCBI] 		251653 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas coronafaciens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYA87448.1 [NCBI]
Genbank nucleotide accession
PP134917 [NCBI]
CDS location
range 29442 -> 30404
strand +
CDS
ATGCCTCAGGGTATTCTGATAGACTTGAATGATGGAAGGCCGGCAATGGAGATTACTGCGGGATTAAGGGCACCAGCAGTGACCGGTTCAATAAACACCAATGGGCTTTCAACTCCGGCAAGTTCGTGGGATTTTGGATTGATAATGTCACCTGGCTCTACGGCTTTCTGCCTACCAACGAAGGCAGTCCACGTTGATGCTTACGATGTTGTACCTGAAGTTTATTATATGAACGGATTCCAAAAGGTTAATGACGGAACTGGCAGGATAACACTTAGTAACTTCAACGGAGCCAAGGGTCGAATAATTGACTTTACTGGGAACTGCTTTGAGATACTACCAGCTTCATCTTCATCAAGTCCTGGAATACTTGTTGAGAATTCAACTGACTTTCTGGCAATATCAAGCAACTCAAGACTAATGTCTGCGGCATGGGTTGGTGGTATTCAGGTTAACGGATCAGCATCACTACCAGTTAGCGGCATACCATTCGGCAAGTGGGATAATCCAAACGTATCACTTGAATCAGATGGATCAACAATATGGTGTAGGGATATAACCTACGGAGGTACAGATGATGTTGCGGCAAGCACTTATGTTCAGCTGGTGATATTCAGGAATGAACCCCCACCGGCCGGGCCTGGACTCACAATGTCAAATAGCTCTGGTCAGATTGTTTTTTCAAGTGTTCGCCGCCCATTTGTTCTTGGTGGATTCATTCAGATCAATAATGGATACCAGTCAATAAATGGTGGATTCTTCCCGCTTCTTAGATGCGGCGCCACTACTAGAGTTACTGGAGGTTATAACAACTTAAGGTACAAGGGGGTTTGCATGTCTGGAGGCTCTGTTAGGGCTGTTCCTGGTTCTGTAATAGGTAACTACTCAACTCAGACTGGCGCTCAGTTTCCTTTCGACACGAACATATCAATGGCACTTCCATTTATCCCAAACTTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
96ffaaca26354171d4960a561c09e29933510bdc52421c11dbd2b6915a650357
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8177
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50