Protein

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Genbank accession
QLB38227.1 [GenBank]
Protein name
tubular tail B protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,80
Protein sequence
MQVRPKKKAPTRKGPEPTSKPQARAHTFPAPIRGWILNENVSIAQPGGALTLDNWICTTTGIEARGGTLAHVTLEAAATALFTYRSGATELFFGTTATKIYDISAATAGIPPISVSGQTGGQYSTQQFGTAGGDYLYAVNGADNAQLFDGATWTLIDGASTPAITGVSTDTLSNVWAFANRLFFVEKTTLNAWYLPVDSIGGLANAFSLAGIFKKGGSLLFGATWSLDAGDGLDDKCIFVSTEGEVAVYEGTNPGSAADWRKVGVYQITKPLGAKAVMQAGGDLLIATESGLVPISAAIQRDVAALELAAVSKNITPHWQSQGSVTGGADWEIVKWPQKNRMIVSQPNDPERTALVANLQTGGWSRMTGWDSQCLGFYDESAFYGDGLGTVYRMEAGGSDNGTPYTCTYIGQHESMGIPGMEKVVSQMRATFKVGTPLNALITAKTDYDETPATAPSAPVDSLDLAIWDVAEWDNAVWDAGGLLQTRAAWSAIGRTGRTVAPEVQITCGNTAIPVIELVSIDASFEIGALVT
Physico‐chemical
properties
protein length:532 AA
molecular weight: 56071,36840 Da
isoelectric point:4,79848
aromaticity:0,08835
hydropathy:-0,03515

Domains

Domains [InterPro]
DC_0395
STR
5–532
DC_0395
QLB38227.1
1 532
Architecture
STR
STR 5-532
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLB38227.1
1 532
Domain Start End Length (AA) Confidence
N-terminal 1 514 514 0,6161
Central domain 515 521 8 0,0011
C-terminal 522 532 10 0,9867
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-514
Central
515-521
C-terminal
522-532

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage phiGT1
[NCBI] 		2745703 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sulfitobacter sp. HGT1
[NCBI] 		2735435 Pseudomonadota > Alphaproteobacteria > Rhodobacterales > Roseobacteraceae > Sulfitobacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLB38227.1 [NCBI]
Genbank nucleotide accession
MT584811 [NCBI]
CDS location
range 11362 -> 12960
strand +
CDS
ATGCAGGTCAGACCCAAGAAGAAAGCCCCGACGCGCAAGGGGCCAGAGCCTACATCAAAGCCACAGGCGCGGGCGCATACGTTCCCTGCACCTATTCGCGGCTGGATACTCAATGAAAACGTGTCCATCGCGCAACCGGGCGGCGCATTGACGCTGGATAACTGGATTTGCACCACAACGGGCATCGAGGCGCGGGGCGGCACGCTGGCACATGTCACGCTAGAGGCGGCGGCAACGGCGCTGTTCACCTATCGCAGCGGCGCGACCGAGTTGTTTTTCGGCACCACGGCAACCAAGATTTACGACATTTCCGCGGCAACGGCTGGCATCCCCCCAATTTCGGTATCGGGACAGACGGGCGGGCAGTATTCGACGCAGCAATTCGGCACGGCGGGCGGCGATTATCTCTATGCCGTCAACGGGGCCGATAACGCGCAGCTTTTCGACGGCGCAACATGGACGCTGATTGACGGGGCCAGCACTCCGGCGATTACGGGGGTTTCAACCGACACGCTTTCAAACGTCTGGGCCTTCGCAAACCGCCTGTTCTTTGTCGAAAAGACAACCCTAAACGCTTGGTATTTGCCAGTCGATAGCATCGGCGGCTTGGCTAATGCGTTCTCACTGGCTGGCATCTTCAAAAAGGGCGGTTCGCTCTTGTTCGGGGCGACATGGTCCTTGGACGCGGGTGACGGTCTGGATGATAAGTGCATTTTCGTCAGCACCGAAGGCGAGGTTGCCGTTTACGAAGGCACAAACCCCGGCAGCGCGGCTGACTGGCGCAAGGTGGGGGTGTATCAAATCACGAAACCCCTCGGCGCAAAGGCCGTCATGCAGGCGGGCGGCGATCTGCTGATTGCAACGGAAAGCGGGCTTGTCCCTATCTCGGCAGCAATTCAGCGCGATGTAGCGGCCCTTGAGTTGGCGGCGGTGTCCAAAAACATCACGCCACATTGGCAGAGCCAAGGTTCCGTCACGGGCGGGGCAGACTGGGAAATCGTCAAGTGGCCACAGAAAAACCGCATGATTGTTTCGCAGCCAAACGACCCTGAAAGAACGGCGCTGGTTGCCAATCTGCAAACGGGCGGCTGGTCGCGCATGACCGGGTGGGATTCCCAGTGCCTCGGCTTCTATGACGAAAGCGCATTCTACGGCGACGGCCTCGGCACGGTTTACCGGATGGAAGCGGGCGGCTCCGACAACGGGACGCCCTACACCTGCACCTATATCGGGCAACATGAAAGTATGGGCATACCGGGAATGGAAAAGGTCGTTTCGCAAATGCGGGCGACGTTCAAGGTCGGCACCCCGCTAAACGCGCTGATTACCGCAAAGACGGATTACGACGAAACCCCGGCCACGGCCCCAAGCGCACCCGTTGATAGCCTGGACCTTGCCATCTGGGATGTTGCGGAATGGGATAATGCGGTCTGGGACGCGGGCGGCTTGCTGCAAACGCGGGCGGCATGGTCGGCTATCGGGCGCACGGGCCGGACGGTCGCGCCAGAAGTGCAAATCACCTGCGGCAACACGGCAATCCCGGTCATTGAACTGGTTTCTATTGATGCATCGTTTGAAATCGGGGCGCTCGTCACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3455a89b4539a35e708cbe78a460a5f83c01633990d955a0ee85a2171e23f998
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Sulfitobacter phage phiGT1, isolated from a tidal flat Hwang,C.Y., Cho,Y., Jang,G.I., Cho,B.C. and Hardies,S.C. 2020-08-13 — GenBank