Protein

View in Explore
Genbank accession
YP_009283408.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTSAVEASAASAAAAKGSEIAAKDSENKAKDSEIMAGIYADSSQTSATQSAASAAESEKQARLSQKSADASATSAEESKGFRDSTELAAQNAENSRRLAEQAKSAAQAAQTAAETAKTGAETAKAGADAAATTAGEHAAAAKQSELNAKTSETNAASSATEAGDKAIDATTEADRAKAEADRATQIVDSKLDKVDISGFIKVYKTKAEADADVGSRVLGEKILVWNQTDSKYGWYKVTGTAEAPVLELAEIEQKLVSINNVRADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVSEAEWQAGAILYFSTGDGSTTFRLPDMMQGQAFRAPIKGEENGGAIKEQIPYITTVNGIGPADDTGAIKLPYVAMVNGAIIPDENGNLALGNVVTKNVWNGTDGEVLLRGAFGLGGTGITLNEPDLVSFFKAMRAFGSGYYRNDIAVDGLPAYSAGFYSRTADTNSFICSGYGSAVVFVAAINDAGLDSENPVVHTNILYGTVNKPDLNGDTNGVLSVGKGGTGATTVSAAKKALEVGGVFCTDSPADDAFNSLQSPAGVHEFRLTNGGIWGVWKKGEETVAALPIGSGGTGATDKVAARDNFELGYHNTPRFTGVDLSNPESIPYSGILNLNRLKESDKNVITQGRIYHEMQSDLAKITLHINNTLNGANRYIQFVENGDLTGLQNVHAVNYLASGYVTAQGWIKGGEKIYIQQTGGGNREISMAVPTPNNDPGAGSWVNLLQGNWYNGYWQVGGVRGSGPDLDCLRIGVNNSGTDWKEFNFYNSYGGHITAPKGFRGQCTQGYWGLEWDYMGAPFHAESVANNDGGWSPIVSGGSLSAGGYHLRIGLGCISNGNAAWPDAALKLNGDGQFHRSFNFRTNGSVYTWGNDPWGGNYDFAMNPSSDRDIKRDINYDDGLASYENIKQFKPTTFIYKLDKYNRVRRGVIAQDLYKIDPEYVKLVPGSPIIETPEHHCCDEKTENVESKIIDYEDDTLALDINPIAIDTALAVRYLSLKFEESQEELKSVKAELAELKALVATLVNK
Physico‐chemical
properties
protein length:1116 AA
molecular weight: 118736,08700 Da
isoelectric point:4,83264
aromaticity:0,08244
hydropathy:-0,34041

Domains

Domains [InterPro]
DC_0608
ATT
2–592
DC_0608 IPR030392
Coil
Unmapped
125–152
Coil DC_0195
IPR030392
CHP
976–1032
IPR030392 Coil
YP_009283408.1
1 1116
Architecture
ATT
STR
ATT 2-592 | STR 593-1116
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage NR01
[NCBI] 		1647411 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus NR01
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009283408.1 [NCBI]
Genbank nucleotide accession
NC_031042.1 [NCBI]
CDS location
range 52726 -> 56076
strand -
CDS
ATGGCGCTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAATATACAGTAGTTTTAGGAAATTCTATTAGCTCTATTACTGCTGGTGAATTAACTTCTGCTGTAGAAGCCTCCGCTGCTTCTGCGGCAGCAGCAAAAGGTTCTGAAATTGCTGCTAAAGATTCTGAGAATAAAGCAAAAGACTCCGAAATTATGGCGGGTATCTACGCAGATTCCTCCCAAACATCAGCTACTCAATCCGCAGCTTCAGCAGCAGAATCTGAGAAACAAGCTAGATTATCTCAGAAGAGTGCAGATGCTTCTGCTACATCAGCGGAAGAGTCTAAAGGGTTTAGAGATTCTACTGAACTAGCTGCTCAGAATGCTGAGAACAGTCGTAGACTTGCTGAACAAGCTAAGTCTGCTGCGCAAGCTGCTCAAACAGCGGCTGAAACTGCTAAGACTGGTGCTGAAACAGCAAAAGCTGGAGCAGATGCTGCTGCTACAACTGCTGGAGAACACGCTGCTGCTGCGAAACAATCAGAATTAAATGCTAAAACTTCTGAGACTAATGCTGCTAGCTCTGCTACAGAAGCTGGGGACAAAGCTATTGATGCTACTACTGAAGCAGATCGTGCTAAAGCTGAAGCAGATCGTGCAACTCAGATCGTTGATAGTAAACTTGATAAGGTAGATATTTCTGGTTTCATCAAAGTTTATAAGACCAAAGCAGAAGCCGATGCTGATGTTGGAAGTCGTGTACTAGGGGAGAAGATCCTAGTATGGAATCAAACTGATTCAAAATATGGGTGGTATAAGGTCACTGGTACTGCCGAAGCTCCTGTTCTAGAATTAGCAGAAATAGAGCAAAAGCTAGTTTCTATTAATAACGTTCGTGCAGATGACGCGGGTAACGTACAGATTACTCTTCCTGGTGGTAACCCCTCTTTATGGCTAGGTGAAGTTACTTGGTTCCCTTATGATAAAGATTCAGGTGTTGGCTACCCAGGTGTTCTTCCTGCTGATGGTCGTGAAGTTCTTCGTGTAGACTATCCAGATACTTGGGAAGCTATTGAAGCTGGTCTAATTCCTTCTGTTTCAGAAGCTGAATGGCAAGCCGGTGCAATCCTATACTTCTCTACTGGTGATGGTTCTACAACCTTCCGTTTACCAGATATGATGCAAGGGCAGGCTTTCCGTGCACCTATTAAGGGAGAAGAAAATGGTGGTGCTATCAAGGAACAAATCCCTTATATCACTACTGTGAATGGAATTGGTCCTGCTGACGATACTGGAGCTATTAAGCTCCCTTACGTGGCGATGGTTAATGGAGCTATTATACCAGATGAGAACGGGAACCTAGCACTAGGTAACGTTGTTACTAAGAATGTTTGGAATGGTACTGATGGAGAAGTTCTACTTCGCGGTGCTTTTGGCTTAGGTGGTACTGGTATTACATTAAATGAGCCAGATCTAGTATCCTTCTTTAAAGCTATGAGAGCCTTTGGTTCTGGGTATTATCGCAATGATATTGCAGTTGATGGCTTGCCCGCGTATTCTGCAGGTTTCTACTCTAGAACAGCAGATACTAACTCATTTATCTGTTCTGGGTATGGCAGTGCCGTAGTATTTGTAGCTGCAATCAATGATGCTGGTTTAGATAGTGAAAACCCTGTTGTTCATACTAATATTCTTTATGGTACTGTTAATAAGCCAGATCTAAATGGTGATACTAATGGAGTTCTTAGTGTTGGTAAAGGTGGTACTGGAGCTACCACAGTTAGTGCTGCTAAGAAAGCTTTAGAAGTTGGTGGAGTTTTCTGTACTGATAGTCCCGCTGATGATGCTTTCAATTCCCTCCAGAGCCCTGCTGGTGTTCATGAGTTTAGACTAACTAATGGTGGAATATGGGGTGTCTGGAAGAAGGGTGAAGAAACGGTAGCTGCGTTGCCTATAGGCTCTGGAGGTACGGGAGCTACTGATAAAGTTGCTGCACGTGATAACTTTGAATTGGGGTATCATAATACTCCTAGATTTACTGGGGTAGATCTATCTAATCCCGAAAGCATACCCTATAGTGGTATCCTTAATCTAAACAGGCTAAAGGAATCTGATAAAAATGTTATTACTCAGGGTAGAATCTATCATGAGATGCAATCAGATTTGGCTAAAATTACCCTTCATATTAACAATACTTTAAATGGTGCAAACCGTTATATACAGTTTGTAGAAAATGGTGATTTAACTGGGCTACAGAATGTACATGCAGTTAACTACCTTGCAAGTGGTTATGTTACAGCCCAGGGATGGATCAAAGGCGGGGAAAAAATCTATATACAGCAAACAGGTGGGGGCAACAGGGAAATTAGTATGGCTGTACCTACTCCTAATAATGACCCTGGTGCTGGTTCTTGGGTTAACTTACTACAGGGTAACTGGTATAACGGTTACTGGCAAGTAGGTGGTGTCCGTGGTAGTGGACCGGACTTAGACTGCCTCCGTATTGGAGTTAACAACTCTGGTACTGATTGGAAGGAATTCAATTTCTACAACTCCTATGGTGGCCATATAACTGCTCCAAAAGGTTTTCGTGGTCAGTGTACTCAAGGATATTGGGGCTTAGAGTGGGATTACATGGGCGCCCCATTTCATGCAGAGTCTGTAGCAAATAATGATGGTGGTTGGTCTCCTATAGTATCGGGAGGTTCTTTATCCGCTGGTGGATATCATTTAAGAATAGGCCTTGGCTGTATCTCTAATGGTAACGCTGCATGGCCTGACGCTGCTCTTAAGTTAAATGGGGATGGCCAGTTCCACCGTTCATTCAACTTTAGAACAAACGGTAGCGTGTATACTTGGGGTAATGATCCTTGGGGAGGTAACTATGACTTTGCTATGAACCCTTCTTCAGATAGAGATATCAAAAGAGATATTAATTATGATGATGGGTTAGCCTCCTATGAGAATATAAAGCAATTTAAACCTACCACATTTATCTATAAACTAGATAAGTATAATCGTGTACGTCGTGGTGTTATTGCTCAAGATCTTTATAAAATTGACCCTGAGTACGTAAAACTGGTTCCTGGTTCTCCTATCATAGAAACTCCAGAACATCATTGCTGTGACGAAAAAACTGAGAATGTAGAAAGTAAGATCATTGACTATGAGGATGATACTTTAGCTCTGGATATTAATCCGATCGCTATTGATACGGCATTAGCAGTTCGTTACTTGTCTCTAAAGTTCGAAGAGTCCCAGGAAGAACTGAAGTCCGTTAAGGCAGAACTGGCAGAGTTAAAAGCTCTAGTAGCCACTCTGGTAAATAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
86b5ae51569507c2864c264648a0713ef647e12a49c3555b55114423a77e2fe8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5756
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of S. Typhimurium Bacteriophage NR01 Lee,J.-H., Lee,H.Y. and Song,N.R. 2012-03-15 — GenBank