Protein

View in Explore
Genbank accession
QIG76097.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MVGFNSSRARLVSGRKGKKGDSGGKESPNTLRSKATARLLDLLGEGEIKGLVNGAKSIYLDETPLMSQSGDYNFKGVSWDIRVGLPDQSVIPGAKGVDAITNVGVEVKYGVPITRALSDPDYNSCVVTIRIPTLSKADDKGNIKPTTVSFRIDIRYQGGPWSTTTGDVTLTGKCVSPYDKQFYFVLPKNPSGASAPWEIRVTRLTEDSDSIKLQNQTVFSSIQGSIEAKFSYPYSALVGMVIDAEQFNGSIPSRAYEVYGRIIQVPSNYTTRLYDANGNITRNSSYSGGWDGTFKWEWTNNPAWIFYDLIVNNRFGLGEFIDPSQVDKWGLYTIAKYCDEMVPNGYGGMEPRMTFNGVISQKREAYDALATMASCFRGMAYWSSGSIMVAQDAPKDPTVLANPSNVIGGVFDRNSSALKARHTVCMVAFNDPRDFYKTNYEVYQNEDGILKYGYRETRIDATGCTSRGQAHRMAKWTVLTELYEKATITYQAGSDHAGVRPGDIVAINDPSQAGAEYGGRLREDCTDTILSLDLPIVFEAPNEYWVSVQMPDGSVEERPIEISAYGAETYQVTLATPLSTAPDPQSMWIVSKTGLEPELFRVITIKESEPHIYDVMGLQYEPSKFDAVDIDAAFELIDTSDIPTGDLVPPTAATFEEYPMSVANIGTVFAVDWSVTPSKDPRIAQYEWWMQSIEEDGTTSAWTMVDTTYDPLVTIQSLEPGYYNFRVRATGALTGTVSAYLTSMSVNILGSNLPPTNVDAFRVNILGEMASLSWTVPTTLNVAHYELRYTPLTENVQWSAATILVEQVSGFGIQVPALKGTYLIKAVSYTGVYSPIAKMVVNDTENIAAMNAVQEYNEHPTFLGTKTDTEVVLEGLQLVETDNTFPPEGTYNFQNTLDLGGIYTSRLTANIDVFGRDTRNTMSSWGLLSGLEAMSSVGSDLWDLALEYRVSNQASTDPLIVWSDWETFIIGDVTFRSIQFRVRLFSLNSAVTPVIRSLSVKIDMPDRIISNKDVLVPTAGLAIAFDPPFKHLTGIAIADQDMATGDRKVITAKSETGFAIRYFNSSGTAVARTFDYTAVGYGVQQ
Physico‐chemical
properties
protein length:1085 AA
molecular weight: 119334,80730 Da
isoelectric point:4,76626
aromaticity:0,10323
hydropathy:-0,19871

Domains

Domains [InterPro]
IPR053171
Unmapped
5–847
IPR053171
DC_0129
STR
19–923
DC_0129
IPR055385
ATT
100–227
IPR055385 IPR032876
QIG76097.1
1 1085
Architecture
STR
ATT
STR
ATT
STR
STR 19-99 | ATT 100-227 | STR 228-360 | ATT 361-514 | STR 515-923 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I4
[NCBI] 		2509735 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG76097.1 [NCBI]
Genbank nucleotide accession
MN988552.1 [NCBI]
CDS location
range 52780 -> 56037
strand +
CDS
ATGGTTGGGTTTAACAGCAGCAGGGCCAGACTGGTCTCCGGTCGCAAGGGTAAGAAGGGCGACAGCGGCGGGAAGGAAAGCCCGAACACGCTGCGCTCGAAGGCGACCGCGCGACTTCTGGACCTGCTTGGCGAGGGCGAGATCAAGGGCCTCGTCAATGGCGCAAAGTCCATTTATCTCGATGAGACGCCTTTGATGTCGCAGTCTGGCGACTATAACTTCAAGGGCGTGTCGTGGGATATTCGCGTCGGTCTCCCAGACCAGTCAGTGATCCCCGGAGCCAAGGGCGTCGATGCCATCACCAATGTCGGCGTCGAAGTCAAGTACGGCGTGCCGATCACCCGCGCGCTGAGCGACCCAGACTATAATAGCTGCGTCGTCACCATCCGTATTCCGACCCTGTCGAAGGCAGATGACAAGGGCAATATCAAGCCCACGACCGTGAGCTTCCGGATCGACATCCGCTATCAGGGCGGGCCGTGGTCTACTACCACTGGTGACGTGACGCTGACAGGCAAGTGCGTCTCGCCATACGACAAGCAGTTCTATTTCGTCCTGCCGAAGAACCCATCCGGCGCAAGTGCGCCGTGGGAAATCCGCGTCACCCGCTTGACCGAAGACAGCGACAGCATCAAGCTTCAGAACCAGACGGTCTTCTCCTCGATCCAAGGAAGCATCGAAGCGAAGTTCTCCTATCCTTACTCTGCCCTCGTGGGCATGGTAATCGACGCCGAGCAGTTCAACGGCAGCATCCCGTCCCGCGCCTACGAAGTGTATGGTCGCATCATTCAGGTGCCGTCGAACTACACGACGCGCCTCTACGACGCCAACGGCAACATCACGCGCAACTCCTCCTACAGCGGCGGCTGGGACGGGACGTTCAAGTGGGAATGGACGAACAACCCCGCATGGATTTTCTACGACCTGATCGTCAATAACAGGTTCGGCCTCGGCGAGTTCATCGACCCGTCGCAGGTGGATAAGTGGGGCCTCTACACTATCGCTAAGTATTGCGATGAGATGGTTCCGAATGGGTACGGCGGCATGGAGCCGCGCATGACGTTTAACGGCGTTATCTCCCAGAAGCGCGAAGCCTACGACGCCTTGGCAACCATGGCCTCGTGCTTCCGTGGCATGGCCTACTGGTCTTCCGGCTCCATCATGGTTGCACAGGACGCGCCGAAGGACCCAACTGTTCTGGCAAACCCGTCCAACGTCATCGGCGGTGTTTTCGACCGCAACTCGTCGGCGCTGAAGGCACGGCACACGGTCTGCATGGTTGCCTTCAACGACCCGCGTGATTTCTATAAGACCAACTACGAGGTCTATCAGAACGAAGACGGCATCCTGAAGTATGGGTACCGGGAGACCCGTATAGATGCAACAGGTTGCACGTCGCGCGGGCAAGCCCATCGCATGGCCAAGTGGACGGTGCTGACCGAGCTATACGAAAAGGCAACTATCACCTATCAGGCGGGCTCCGATCATGCGGGCGTCCGGCCCGGCGATATCGTTGCCATCAATGACCCGTCGCAGGCAGGCGCGGAGTACGGTGGGCGTCTAAGGGAAGACTGCACTGACACCATCCTGTCTCTCGATCTCCCTATTGTCTTCGAAGCGCCTAACGAATATTGGGTATCCGTCCAGATGCCTGACGGCAGCGTGGAAGAGCGTCCGATAGAAATCTCCGCCTACGGTGCCGAGACGTATCAGGTGACCTTGGCCACGCCGCTCTCGACCGCGCCTGATCCTCAGTCCATGTGGATTGTCTCCAAGACTGGTCTTGAGCCAGAGCTCTTCCGTGTTATCACGATAAAGGAGAGTGAGCCGCACATCTACGACGTGATGGGTCTGCAATACGAGCCGTCGAAATTCGACGCCGTGGATATCGATGCGGCCTTCGAACTGATCGACACCTCTGACATTCCGACCGGCGACCTCGTTCCGCCCACGGCGGCGACGTTCGAAGAATATCCGATGTCCGTTGCCAACATCGGCACGGTGTTCGCGGTTGACTGGTCAGTGACGCCCTCGAAAGACCCGCGCATCGCGCAGTATGAATGGTGGATGCAGTCTATCGAGGAAGACGGCACCACCTCGGCGTGGACTATGGTCGATACCACGTATGACCCGCTTGTCACGATCCAGTCTCTGGAGCCGGGCTATTACAACTTCCGCGTCCGGGCGACGGGAGCCCTGACCGGTACCGTCTCAGCCTACCTAACCAGCATGAGCGTCAACATTCTGGGAAGCAATCTTCCTCCTACGAACGTCGATGCCTTCAGGGTCAACATTCTCGGCGAGATGGCTTCGCTGTCATGGACTGTCCCGACAACGCTGAACGTGGCCCACTACGAGCTTCGTTACACTCCCTTGACGGAGAACGTTCAGTGGTCAGCCGCGACGATCCTTGTCGAACAGGTTTCCGGCTTCGGCATTCAGGTACCGGCTCTCAAGGGAACCTACCTGATCAAGGCGGTGTCTTACACAGGTGTTTATTCGCCTATCGCCAAAATGGTGGTGAACGATACCGAGAACATCGCAGCTATGAATGCGGTACAGGAGTATAACGAGCATCCGACTTTCCTCGGAACGAAAACCGACACGGAAGTCGTACTTGAGGGGTTGCAGCTTGTCGAAACCGACAACACCTTCCCTCCTGAAGGAACGTATAATTTCCAGAACACCCTCGATCTCGGAGGCATCTACACGTCTAGGCTAACAGCCAACATCGACGTGTTCGGTCGCGACACTCGCAACACTATGAGTTCGTGGGGCCTCCTCTCCGGTCTCGAAGCCATGTCGAGCGTCGGTTCGGACCTCTGGGATTTGGCGCTGGAGTACCGCGTTAGCAATCAGGCCTCGACCGATCCCTTGATCGTCTGGAGTGATTGGGAGACGTTCATCATCGGCGACGTGACCTTCAGGTCTATCCAGTTCCGCGTCCGGCTGTTCTCCCTTAACTCGGCTGTGACGCCGGTCATCCGCTCGCTGTCGGTGAAGATTGACATGCCTGACCGCATCATCTCGAACAAGGATGTGCTGGTGCCGACCGCCGGTCTCGCGATCGCTTTCGATCCGCCTTTCAAGCATCTCACGGGCATCGCCATCGCCGACCAAGACATGGCGACCGGTGACCGGAAGGTGATCACGGCGAAGTCCGAGACGGGCTTCGCCATTCGTTATTTCAACTCGTCCGGTACCGCAGTAGCGCGAACCTTCGATTACACCGCCGTTGGCTATGGAGTGCAACAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2bf6c26095c7ce0e5c975823b03aea9456dbf157b047509acbd4fad3f678bc08
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2822
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank