Protein

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Genbank accession
YP_012883081.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MIKFHKVSGKPAKVESGDENIWFSYPNGIYVADNQGNPRLISPGKMIGDAVPVGVPNEPGLFYYNTSNKKNYISTAEKWVEIGTDSIPGTGGGSNIAGNVLINDTADNYTSVDVEGALAEIAEKFPWYFGRMQLKDFNGDVNALLKSTENYITTSAANRPNGKTGWLIQRKASNNNTYGFVIGDDGTAQTRVNDKFTPLAAQSDLAKLQNTVDSSLGELKVNVGKGLASDGKTLANGQTISLAQDILDKIDAAGAGANFVKKAGDTMTGSLVMKAGSGQVSQVQFSSTGSANNVAILDDPRGTSKNSPYGGKEGGSRFRIANVKKNFDIMSAYSDGSVDIHANGPRAVFGNASTNGRTTILNNNNSGGTSVDIVAPFSDVPLFVKGKNGQLHYKVNGGMNSLLSGNSSSGRKNLRIAGMGSNSELATLYFEAWNTRAKGKIHSGSAINVGFNHETSKGTGDGDVCLRIFPRKAGLNGEANALRNYAVLYYEQYSQTLVVDSFKGNANFTSNERNNFVRLSSDGFITRSSVKYKNPIKKFEEDALSKVKEVTPELYAYKNDPKQSTQLGFIIEHGLPQEVVEMEGRGVNAYALTAYLWRATQQLSQEVDSLKEELENLRNS
Physico‐chemical
properties
protein length:620 AA
molecular weight: 66658,40080 Da
isoelectric point:8,63465
aromaticity:0,08387
hydropathy:-0,46903

Domains

Domains [InterPro]
DC_1220
STR
4–620
DC_1220
Coil
Unmapped
600–620
Coil
YP_012883081.1
1 620
Architecture
STR
STR 4-620
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012883081.1
1 620
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,9392
Central domain 271 469 200 0,0612
C-terminal 470 620 150 0,9957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-469
C-terminal
470-620

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage H1
[NCBI] 		2982918 Uroviricota > Caudoviricetes >
Host Enterococcus faecium
[NCBI] 		1352 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012883081.1 [NCBI]
Genbank nucleotide accession
NC_112203.1 [NCBI]
CDS location
range 88173 -> 90035
strand -
CDS
ATGATTAAGTTTCACAAGGTTAGCGGCAAACCCGCTAAAGTAGAATCTGGCGATGAAAATATTTGGTTTTCTTATCCAAACGGTATTTATGTTGCTGACAACCAAGGTAACCCACGATTAATTTCCCCAGGGAAAATGATTGGCGATGCTGTTCCTGTGGGAGTACCAAATGAGCCAGGTCTATTTTATTATAATACATCAAATAAAAAGAATTATATTTCCACCGCCGAAAAATGGGTTGAAATTGGCACCGACAGTATTCCAGGAACAGGTGGAGGCAGCAATATCGCTGGTAATGTTTTAATTAACGATACCGCCGATAATTATACCTCGGTAGATGTTGAAGGTGCTCTTGCTGAAATCGCCGAAAAATTCCCATGGTATTTTGGCAGAATGCAATTAAAAGATTTTAATGGTGACGTTAATGCCTTATTAAAATCCACTGAAAATTATATTACAACTAGCGCCGCAAATCGCCCCAATGGTAAAACAGGTTGGCTCATCCAACGCAAGGCTTCTAATAATAATACTTATGGATTCGTCATTGGCGATGATGGCACCGCTCAAACAAGGGTCAACGATAAGTTCACCCCACTAGCGGCCCAATCGGACCTTGCCAAACTACAAAATACTGTTGATTCCTCTCTTGGGGAATTAAAGGTAAATGTAGGAAAAGGATTGGCTTCTGATGGAAAGACATTGGCAAATGGACAAACTATTTCATTAGCGCAAGATATTTTAGATAAAATTGATGCCGCCGGAGCTGGAGCTAATTTTGTTAAAAAAGCTGGAGATACTATGACTGGTTCTCTAGTAATGAAGGCTGGTTCTGGACAGGTTTCTCAAGTACAATTTAGTAGCACAGGTTCTGCTAATAATGTGGCAATATTGGATGACCCAAGAGGAACGTCCAAGAATTCTCCTTATGGAGGAAAAGAAGGCGGTTCTCGTTTTAGAATTGCTAATGTGAAGAAGAATTTCGATATCATGTCAGCTTATAGTGATGGGTCGGTTGATATTCATGCAAATGGTCCTCGTGCAGTATTTGGTAATGCAAGTACTAATGGACGAACTACTATTTTGAATAATAATAATAGTGGTGGGACTTCAGTTGATATTGTTGCGCCTTTTAGTGATGTTCCATTATTTGTTAAGGGTAAAAATGGACAGCTGCATTATAAGGTTAATGGTGGAATGAATAGTTTGCTTTCTGGTAATAGTAGTAGTGGTCGTAAAAATTTACGTATTGCTGGTATGGGAAGTAATTCTGAATTAGCTACATTGTATTTTGAAGCATGGAATACAAGAGCTAAAGGTAAAATTCATTCTGGTTCAGCTATTAATGTTGGTTTTAACCATGAAACTTCTAAGGGTACTGGTGATGGGGATGTATGTTTACGTATCTTCCCAAGAAAAGCTGGGCTTAATGGTGAGGCAAATGCTTTAAGAAACTATGCTGTATTATATTATGAGCAATATAGTCAGACTTTAGTCGTTGACTCATTTAAGGGTAATGCAAACTTTACAAGCAATGAACGTAATAATTTTGTACGTTTATCTTCTGATGGTTTTATTACACGTTCTTCAGTAAAATATAAGAATCCTATTAAGAAATTTGAAGAAGATGCTTTATCAAAAGTTAAAGAAGTTACACCTGAATTATATGCTTATAAAAATGATCCAAAACAAAGTACTCAATTAGGATTTATTATCGAGCATGGTCTTCCCCAAGAGGTAGTAGAAATGGAAGGGCGAGGCGTGAACGCTTATGCGCTGACAGCTTATCTATGGAGAGCGACACAACAACTGTCTCAAGAAGTAGATTCATTAAAAGAAGAATTAGAAAATTTAAGAAATAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7515549ce064ea58e8cdd9c9f26d5630c96b09ef1e10d9de8b7acf33955b60ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5906
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50