Protein

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Genbank accession
QIW86562.1 [GenBank]
Protein name
tail collar protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MADITYRLEKGSPLTNQEMDDNLRELDENRIKTDTIGQADGVTPLGPDSKVPPEFLPEIPSGPAVGTPNWWPLRASIPAGQIPQDGQEVSRATYPDLAAMVIAGTLPVVAEATWQSDPTQRGKYTLGDGSTTIRVPDLNGMSSGSLGAVVRRGDGALSAGTGGLIQRDAFQNFTGQAQVRKGAGGERPIASATGAFRIYQDAGPGWDRINAAAGAPLSSDLFTIDPSLVARTATETRSLNVTGVWTVHAFGAVVNPGSADAAQLASDYAVLNSAVQTLQSQIARAFGVGQQWFEYTVAERGGSNTYVNSTPQTILVNYQGQTIGAGNITIVVDGEQYERSFWDSTNTGAGFGKTFPVPSGSSYNITGASFNRVKWREYRNIK
Physico‐chemical
properties
protein length:382 AA
molecular weight: 40492,35960 Da
isoelectric point:4,95064
aromaticity:0,08115
hydropathy:-0,32435

Domains

Domains [InterPro]
DC_2268
ATT
1–65
DC_2268 DC_1514
SSF88874
STR
59–250
SSF88874
IPR037053
ATT
63–142
IPR037053
DC_2049
STR
140–375
DC_2049
QIW86562.1
1 382
Architecture
ATT
STR
ATT 1-142 | STR 143-375 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage AMA2
[NCBI] 		2723727 No lineage information
Host Achromobacter marplatensis
[NCBI] 		470868 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW86562.1 [NCBI]
Genbank nucleotide accession
MT241607 [NCBI]
CDS location
range 1553 -> 2701
strand +
CDS
ATGGCAGATATCACTTACCGGTTGGAAAAGGGCTCGCCCCTTACCAACCAGGAAATGGACGACAACCTTCGTGAGTTGGACGAAAATCGTATCAAGACGGATACGATTGGTCAAGCTGACGGGGTAACTCCTTTGGGGCCTGACAGTAAAGTTCCGCCTGAATTTCTCCCTGAAATTCCGTCAGGGCCAGCTGTTGGTACACCGAATTGGTGGCCGCTCCGTGCGTCCATCCCTGCAGGGCAGATCCCGCAGGACGGACAAGAAGTTTCGCGTGCAACCTACCCGGACCTCGCTGCAATGGTGATTGCTGGGACGCTTCCAGTTGTCGCAGAAGCGACGTGGCAGAGCGACCCCACCCAGCGCGGAAAGTACACGCTGGGTGACGGATCCACTACCATCCGCGTGCCGGACCTGAACGGTATGTCTTCCGGTTCGCTCGGTGCTGTGGTGCGACGCGGTGACGGTGCCTTGTCGGCGGGTACCGGCGGGTTGATTCAGCGTGATGCATTCCAGAATTTCACAGGGCAAGCACAAGTACGCAAGGGTGCAGGCGGGGAGCGCCCTATTGCATCGGCAACCGGGGCTTTTCGCATTTATCAAGATGCAGGACCTGGGTGGGACCGTATCAACGCTGCAGCGGGCGCGCCGTTGTCTTCGGACCTATTTACTATCGATCCGTCTTTGGTCGCTCGCACAGCCACCGAAACTCGATCGTTGAACGTCACTGGTGTATGGACTGTTCATGCCTTCGGAGCAGTCGTAAATCCTGGAAGTGCCGATGCAGCGCAGCTCGCGAGTGACTACGCGGTACTGAATTCAGCTGTGCAAACTTTGCAGTCTCAAATAGCACGAGCGTTCGGCGTGGGTCAGCAATGGTTTGAGTACACGGTGGCGGAACGCGGCGGCTCTAACACTTATGTCAACAGCACACCACAGACTATCTTGGTTAACTACCAAGGGCAAACTATCGGCGCTGGTAACATAACCATTGTCGTAGACGGAGAGCAATACGAACGTTCTTTTTGGGACAGCACTAACACTGGTGCTGGTTTCGGGAAGACTTTTCCAGTACCCTCCGGATCTAGCTATAACATTACCGGGGCTAGTTTCAATCGAGTTAAGTGGCGCGAGTACAGGAACATCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34f8098e4db6c38bf1c7fbb72e50e32063894b493f4886e36b46672b7c9a49e7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of novel bacteriophages capable of lysing clinical strain of Achromobacter marplatensis Ku,H., Chan,H.T., Brown,T., Kabwe,M., Low,Y.P., Batinovic,S., Petrovski,S. and Tucci,J. 2020-10-08 — GenBank