Protein

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Genbank accession
ATS92214.1 [GenBank]
Protein name
tail assembly protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MATIVIPQRFAQRRDTTANWNSKDPVLWSGEVGILMDPGQAVKLKVGDGTKKWSQLDFFASDGKPVQLRAADGFIQWNYVGDTSWINLVSLDSLRGADGDDGDDGDDGESAYEIAVDGGFIGTVPEWLASLKGEPGDKGDKGDAGNPGTPYARRIQHVADTDAGTFECDWSQYDEIRISLTATVVLSFTGAIDGQGCVLKLRQPPAGGCQVGLPGGVVRFNSLIQAYVVTQTGSRADKVGFVFDGEDARYDLVSIIPGI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 27664,44040 Da
isoelectric point:4,41465
aromaticity:0,08880
hydropathy:-0,24556

Domains

Domains [InterPro]
DC_1473
STR
1–257
DC_1473
SSF69349
STR
9–108
SSF69349
IPR041352
ATT
13–50
IPR041352
ATS92214.1
1 259
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-50 | STR 51-257 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage DLP4
[NCBI] 		2047758 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS92214.1 [NCBI]
Genbank nucleotide accession
MG018224 [NCBI]
CDS location
range 6359 -> 7138
strand +
CDS
ATGGCAACCATCGTAATACCACAGAGGTTTGCCCAGCGCCGTGACACCACGGCCAACTGGAACAGCAAGGACCCCGTCCTCTGGAGCGGCGAGGTCGGCATCCTCATGGACCCGGGCCAGGCCGTCAAGCTGAAGGTCGGTGACGGCACGAAGAAGTGGAGCCAGCTCGACTTCTTCGCCTCCGACGGCAAGCCTGTACAGCTGCGTGCGGCCGATGGATTCATCCAGTGGAACTATGTAGGCGATACCTCCTGGATCAACCTGGTGTCGCTGGACAGCCTCAGGGGCGCAGACGGTGACGACGGTGACGACGGTGACGACGGTGAGAGTGCCTATGAGATCGCCGTCGACGGCGGCTTTATCGGCACCGTGCCGGAGTGGCTGGCCTCACTGAAGGGCGAGCCTGGTGACAAGGGCGACAAGGGCGACGCTGGCAATCCCGGCACGCCCTATGCCCGACGGATCCAACACGTGGCCGACACCGACGCAGGCACCTTTGAGTGCGACTGGAGCCAGTACGACGAGATTCGCATCTCCCTGACCGCCACCGTGGTGCTGAGCTTTACTGGTGCCATCGACGGCCAGGGTTGTGTACTGAAGCTGCGCCAGCCGCCAGCAGGAGGGTGCCAGGTCGGGCTGCCTGGCGGCGTGGTCCGGTTTAACTCCCTGATCCAGGCCTACGTCGTGACCCAGACCGGGTCCAGGGCGGACAAGGTTGGTTTCGTCTTCGACGGCGAAGACGCACGATACGACCTGGTCTCCATTATTCCCGGGATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c6ecb44b8453ac706194257d506a8db533077d7e0c9aee4da026db50a6f28ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lysogenic conversion of Stenotrophomonas maltophilia by temperate phage DLP4 Dennis,J. and Stothard,P. 2019-04-16 — GenBank