Protein

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Genbank accession
QLF88126.1 [GenBank]
Protein name
putative E3 ubiquitin-protein ligase HERC6
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MYGLSAFSQSPYSALGTITKTGAAQIQSVGTLTASALRERTAAASINATATLTADGLRIRFGDASVNGQATVTALGGLLKTATGSVTGTATVTANAIYIAFGEGDISGRATLTVALSGSIIYADASISGTATLTADGLRIRFGNASISGTATVSALGGLVATGNASVEGIATLTAASSVTRFANASIDGVGTVTAIGYLLGEEWTDVPVEENTWSAVSAGSDVWTDSTVGTNDWKRQG
Physico‐chemical
properties
protein length:238 AA
molecular weight: 23656,91720 Da
isoelectric point:4,62234
aromaticity:0,05882
hydropathy:0,27899

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Methylophilales phage Venkman EXVC282S
[NCBI] 		2727865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF88126.1 [NCBI]
Genbank nucleotide accession
MT375522 [NCBI]
CDS location
range 23186 -> 23902
strand -
CDS
ATGTACGGCTTATCTGCATTTTCACAAAGTCCATATTCTGCACTAGGCACTATAACAAAAACAGGTGCTGCACAGATACAAAGTGTAGGCACTCTTACAGCTAGTGCATTAAGAGAAAGAACTGCTGCTGCATCTATTAATGCAACTGCAACACTGACAGCAGATGGGTTAAGAATAAGATTTGGTGATGCAAGTGTTAATGGTCAAGCGACTGTTACTGCATTAGGTGGGTTATTAAAAACTGCAACAGGTTCTGTTACTGGAACTGCTACTGTTACTGCTAATGCTATTTATATAGCATTTGGTGAGGGCGATATTAGTGGTCGTGCAACATTAACAGTTGCTCTATCAGGTTCTATTATTTATGCTGATGCAAGTATAAGTGGCACAGCTACGCTAACTGCTGATGGGTTAAGAATAAGATTTGGTAATGCGAGTATATCAGGAACAGCAACAGTATCTGCATTAGGTGGGCTTGTTGCTACAGGAAATGCAAGTGTAGAGGGAATAGCAACTTTAACAGCAGCAAGTTCTGTAACAAGATTTGCTAATGCTTCTATAGATGGTGTAGGTACAGTAACAGCAATAGGATATTTACTGGGTGAAGAATGGACTGATGTACCAGTAGAAGAAAATACATGGTCAGCAGTATCGGCAGGTAGTGATGTATGGACAGACTCAACAGTAGGAACTAACGATTGGAAACGACAAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d9a0726bccaf098502fa2cb1874e04641236993248b30ed6573b32679776a1e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4435
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50