Protein

View in Explore
Genbank accession
WNV48664.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANEIGTATNFEDFFSKIVAFLTTNAALVSAGQAWQALRVRRDNIDTYTTSLPDSFTGNGRKQIHTFRYDPRSLNTNNPAQNGSESFWYTNSGFSAGSSYGQWKLRQAREVKTVRIKAPIGSSYASYAPKSFRLQYSDDGTAWTTALTVSNAPNWSVGERRDFAVPGTPGSHLYWKIIWDATQAVSYIGWQELLLLEADGTVANHFGSEVILKALGNSGLDEIYTGIRAEYDSAAGWYNLFMNGYTGYDANEPSWFNQPGALPGYGAQYTRATPMVPLWNTTMPYWMVASGRSFRFCVKVGTNYEGGYLGFILPYATPNQYPYPLAVGGSLCPINDTSRSAEWRYSYVSYTHGVYPGPGTMNYPESESNWATLYLRSPEGAWNYHGNRSSHGSSNSEGIGGPTVSSSPPYNLNTTNAGLRNVWPHCMNGQWSSGRRPYRECLGGGYILQPCVLIQRSPAQVLGELEGTFAISGYQNSAENTTVFNGKTHVVFQNAYRNTIHEHWALSMD
Physico‐chemical
properties
protein length:509 AA
molecular weight: 56381,72880 Da
isoelectric point:6,79961
aromaticity:0,13949
hydropathy:-0,45599

Domains

Domains [InterPro]
DC_0072
STR
1–509
DC_0072
G3DSA:2.60.120.260
STR
72–191
G3DSA:2.60.120.260
PF22633
RBD
82–163
PF22633
IPR008979
STR
82–152
IPR008979
WNV48664.1
1 509
Architecture
STR
STR 1-509
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNV48664.1
1 509
Domain Start End Length (AA) Confidence
N-terminal 1 38 38 0,1499
Central domain 39 237 200 0,6638
C-terminal 238 509 271 0,9727
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-38
Central
39-237
C-terminal
238-509

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Clover
[NCBI] 		3046816 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV48664.1 [NCBI]
Genbank nucleotide accession
OQ992553 [NCBI]
CDS location
range 169 -> 1698
strand +
CDS
ATGGCAAACGAAATCGGAACCGCGACGAACTTTGAGGACTTCTTCAGCAAGATCGTCGCCTTTCTCACCACGAACGCGGCACTGGTGTCGGCAGGTCAGGCTTGGCAGGCGCTGCGTGTCCGCCGGGACAACATCGACACGTACACCACCAGCCTCCCGGACTCCTTCACTGGTAACGGTCGGAAACAAATTCACACATTCCGCTATGATCCGCGGTCACTGAACACGAACAACCCCGCCCAGAACGGTTCGGAGTCCTTCTGGTACACCAACTCAGGCTTCTCCGCCGGGAGCAGCTATGGTCAATGGAAACTGCGACAGGCGCGCGAAGTCAAGACCGTGCGCATCAAGGCCCCTATCGGGTCCAGTTACGCGAGTTATGCCCCCAAGTCCTTCCGGCTCCAATACTCGGATGACGGAACCGCCTGGACTACGGCCCTGACCGTCTCGAACGCGCCGAACTGGTCCGTTGGGGAGCGCCGGGACTTCGCCGTGCCCGGCACCCCCGGTTCACACCTGTATTGGAAGATCATCTGGGACGCGACTCAAGCGGTGAGCTACATCGGGTGGCAGGAACTCCTCCTGCTCGAAGCGGACGGGACGGTGGCCAACCACTTCGGGTCGGAGGTCATCCTAAAGGCCCTGGGCAACTCGGGTCTGGACGAAATCTACACCGGCATCCGGGCGGAGTACGACAGCGCAGCGGGTTGGTACAACCTGTTCATGAACGGGTACACAGGCTATGACGCCAACGAGCCTTCCTGGTTCAACCAACCGGGAGCCCTCCCGGGCTACGGGGCGCAATACACTCGGGCAACCCCGATGGTCCCACTGTGGAACACCACCATGCCGTACTGGATGGTGGCTTCTGGCCGCTCCTTCCGGTTCTGTGTCAAGGTCGGCACGAACTATGAGGGAGGCTATCTTGGTTTCATCCTCCCGTATGCTACGCCCAATCAATACCCGTACCCGCTCGCAGTCGGGGGTTCGCTCTGCCCCATCAACGACACCTCCCGGTCCGCGGAGTGGCGCTATTCATACGTGAGCTACACCCACGGCGTGTACCCGGGGCCGGGCACTATGAACTACCCTGAAAGCGAATCGAACTGGGCAACCCTTTACCTGCGCAGCCCGGAAGGAGCGTGGAACTACCACGGCAACCGTTCGTCCCACGGTTCGTCCAACTCCGAAGGCATAGGTGGTCCGACCGTCAGCAGCTCGCCTCCCTACAACCTCAACACCACCAACGCCGGTTTGCGCAACGTCTGGCCTCACTGCATGAACGGCCAGTGGTCCTCGGGCCGGCGCCCCTACCGCGAGTGCTTGGGCGGCGGGTATATTCTCCAGCCTTGCGTGCTGATTCAGCGGTCGCCTGCCCAAGTCCTCGGGGAGCTGGAGGGGACGTTTGCAATCAGCGGGTACCAAAACAGCGCGGAGAACACGACCGTGTTCAACGGCAAGACTCACGTGGTGTTCCAGAATGCTTACCGCAACACGATCCACGAGCACTGGGCGCTGTCGATGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f861f60cc4f6caa1801a4f7422f4c800ad870e7947dad4ac744f91647c22875b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6769
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo phages are active against extensively-drug-resistant eyedrop-associated Pseudomonas aeruginosa infections Cobian Guemes,A.G., Ghatbale,P., Blanc,A., Morgan,C., Garcia,A., Leonard,J., Huang,L., Kovalick,G., Proost,M., Chiu,M., Kuo,P., Oh,J., Karthikeyan,S., Knight,R., Pogliano,J., Schooley,R. and Pride,D. 2024-10-29 — GenBank