Protein

View in Explore
Genbank accession
WCZ57934.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSRPLMPKSGAMAPYIVVNRDAAVAGVFSVDGEAGAVVLTSKYLQIANYTIDKEELNTRLTGIDSSISNLNESTGNLNTAVGGINTSIEGINTSISGINTKTTALEDGKAEKGANNDITELNALTKAITIAQGGTGSTTQEGAKTALGIDRLIQLEDYTVLSAPDNTRIAIGNAGELAFQDKDGVQIAIPVSAGGTGVRTQADLWPAVRPTGATPLAGDPVDPYDATTKRWVENLVGAGTTGPTLNGIMNYGVGMPVSWISRAYIPPYLQPLDGQLLKRAEYPDLWAHAQQHGTITDADWLADQTKRGAYSDGDGSTTFRVPDWNGVQVNSIPGVFFRGGSGAADMAMSLSAAPNITGRTGLILTSRTTTSSGSLTDNWSNYWSVAEPGGEQFKRVSRELRGDRCFKI
Physico‐chemical
properties
protein length:408 AA
molecular weight: 42975,43100 Da
isoelectric point:4,92086
aromaticity:0,06373
hydropathy:-0,24485

Domains

Domains [InterPro]
DC_0017
STR
1–398
DC_0017
SSF88874
STR
249–385
SSF88874
WCZ57934.1
1 408
Architecture
STR
STR 1-398 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K38
[NCBI] 		3027626 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57934.1 [NCBI]
Genbank nucleotide accession
OQ291035.1 [NCBI]
CDS location
range 78921 -> 80147
strand -
CDS
ATGTCTAGACCATTAATGCCTAAATCCGGCGCAATGGCGCCATACATCGTGGTTAACAGAGATGCTGCTGTTGCAGGAGTATTCTCTGTTGATGGAGAGGCTGGTGCTGTTGTACTAACCTCCAAGTATCTTCAAATAGCTAACTACACTATAGATAAAGAAGAATTAAATACTCGTCTTACTGGTATTGATTCTTCTATTAGTAACTTAAATGAATCTACTGGTAATCTTAATACTGCCGTTGGAGGTATTAATACTTCTATAGAAGGAATTAACACTTCTATTAGTGGAATCAACACTAAGACTACTGCTTTAGAAGATGGCAAGGCTGAGAAAGGTGCTAATAACGATATCACAGAATTAAATGCACTTACTAAAGCTATAACAATTGCACAGGGTGGTACAGGTTCTACTACGCAAGAAGGGGCAAAGACTGCTCTGGGAATAGATAGGCTTATTCAACTTGAAGATTATACTGTATTATCTGCACCAGATAATACAAGAATTGCGATAGGTAATGCCGGTGAATTAGCTTTTCAAGATAAAGATGGTGTTCAAATTGCTATACCAGTCTCAGCAGGCGGTACTGGAGTTAGAACTCAAGCAGACTTATGGCCAGCAGTTCGACCAACTGGTGCCACTCCTCTAGCAGGAGATCCTGTTGACCCGTATGATGCTACTACCAAACGTTGGGTTGAAAACTTAGTAGGTGCTGGTACAACCGGTCCAACACTAAATGGTATTATGAACTATGGGGTTGGTATGCCAGTATCGTGGATATCTCGTGCGTATATTCCTCCATACTTACAACCTCTAGATGGCCAACTGCTAAAACGTGCTGAGTATCCTGATCTCTGGGCACACGCGCAGCAACACGGTACAATTACCGATGCTGATTGGTTAGCTGATCAAACTAAGCGTGGTGCATACTCTGACGGTGATGGCTCAACAACTTTCCGTGTACCTGACTGGAACGGTGTACAAGTTAACTCTATACCTGGCGTATTCTTCCGTGGCGGTAGTGGCGCAGCGGATATGGCTATGTCACTAAGTGCTGCACCGAATATTACGGGTAGAACTGGGCTTATACTTACATCCCGCACCACAACATCCTCGGGTTCTCTTACTGATAATTGGTCCAACTACTGGAGCGTAGCGGAACCGGGGGGGGAACAGTTCAAACGTGTATCGAGAGAACTCCGTGGGGATAGATGCTTCAAAATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
88a303c897bf44ecaa8f0929964ac1acaaed2760e46b3d04bda63b8bd3457a15
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6970
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K38 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank