Protein

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Genbank accession
QPB11974.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDILGTLFSQGTRKIGMIVPSVVISEKHSDSSEITEHPVQVPGGEGFTVSDHTFDRPSEVVMEIGFAGGGSLIDGFDTSTMFDVSTGLKLGSSPREIYQQLLDLRATKQPFDVITGKRDYKNMLIRAIEVTTDKASENVLMVTLTLRQVIIVEAKGKNVAPLENQKMPEVTGGMVDRGTVTPKPVRVSILQRGKDFSVTSMEDIIKILSGK
Physico‐chemical
properties
protein length:211 AA
molecular weight: 22969,18500 Da
isoelectric point:5,68074
aromaticity:0,04739
hydropathy:-0,10948

Domains

Domains [InterPro]
DC_0601
STR
1–209
DC_0601
IPR048494
ATT
21–155
IPR048494
QPB11974.1
1 211
Architecture
STR
ATT
STR
STR 1-20 | ATT 21-155 | STR 156-209 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage PSTCR3
[NCBI] 		2783545 No lineage information
Host Providencia stuartii
[NCBI] 		588 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB11974.1 [NCBI]
Genbank nucleotide accession
MW057855.1 [NCBI]
CDS location
range 7380 -> 8015
strand +
CDS
ATGGATATTTTAGGTACGCTGTTTTCTCAAGGTACTCGAAAAATCGGCATGATAGTCCCCAGCGTGGTGATATCAGAAAAGCACTCCGACAGCTCTGAAATTACCGAACATCCTGTTCAAGTGCCGGGAGGCGAAGGATTTACAGTTAGTGATCATACTTTCGATAGACCCTCAGAGGTTGTGATGGAAATCGGCTTTGCTGGTGGCGGTTCGCTAATCGATGGTTTTGATACATCCACCATGTTTGATGTTTCAACGGGGCTAAAGCTCGGTAGTAGCCCCCGCGAAATCTATCAGCAGTTGTTAGACCTACGAGCAACCAAGCAGCCTTTTGATGTTATTACTGGTAAACGTGATTACAAAAATATGCTTATCCGAGCGATTGAAGTTACAACAGATAAAGCCAGTGAAAACGTCCTTATGGTCACTTTGACATTAAGACAGGTGATCATTGTTGAAGCCAAGGGCAAAAATGTAGCCCCTCTGGAAAACCAGAAAATGCCAGAAGTGACCGGGGGAATGGTTGATAGGGGTACGGTAACGCCCAAACCTGTAAGAGTAAGTATTTTGCAACGCGGAAAGGATTTTTCTGTTACATCTATGGAAGATATAATTAAAATATTATCAGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5c64a63410db670d0284f933f4b87c3c1bb2d6ee05c1b7deceb1b45900fc1c0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages targeting Providencia spp. as potential agents for phage therapy Rakov,C., Alkalay-Oren,S., Coppenhagen-Glazer,S. and Hazan,R. 2021-04-02 — GenBank