Protein

View in Explore
Genbank accession
WWQ71937.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MTITVDDVKLLKSQRLTDEDDGGGRATGQAVVDREINNLFPDISRLDRTIGRINLRKAFAGISSNSAEPYLGAHAIVTRAPADPRVSVLLFNTGSQTDERRDARNAIESFVVPAVSASFELLGNQLQGQRAIACVQREEQRLPEIGEVYQLVFESRSQYVRITDVEARLEQFAHDYGNGNFVNFTRRRLDLSISAPLGATFPGGQVTPGGTTSPKSQVLSTQVADAARYYGISPLAEAVSRGALSLRVKSVYSQLVPSTTRENALVDQLAGYQRRLFAAAGPARTVNLNVANIGSGRSRTFLGTGCAPGSLSLSAGGGVFADDRKGGLRYISGSNWIASGTVDYESGAIEMAASGSGWSGTASATYQPAAAATGEAVTGEIPIELGNRGFVYTLSLSEAPPQPGTLVVSFLALGKWQEIRDQGNGELAGEGTGTVDFATGSVSITLSALPDVGSSLIYAYVGQNDAALTQRTGTSVQARARINRTLPHQGLLPGSYKATFKVGGVERTVLDSGNGSLSGTVGSGQINYADGKVSMELSATPDAGSGIVHTYQQGSVTDSPLAVTSDSTGMCIGTLPGAPLKAGSVRLSWITKRRQAAPTLGADMGTGALPIFESEITVDNSVTDDAAGGWAGRAGTINYETGEFSLKVAGNYVFKEYTYYTDTVDNFGMKKLRLVATDTTLLEGFGGTLSVRAQSRGVEYGEQTDSQTVAPVTLDLLPGVAEPILPGSLVFTWAGEVYVDRSGVLYKNINSSTNAGIAVGSVDYAGRTATLNTYGSGAGPTVTLLACLTTNAGFSVTSMTFRTPGAPLRSASLQVTAVRLDTAQIVTTTADANGKLNGAVIKGSVDIVTGIVRLRFTSNLEDTTGASDIPVIPLLLRYNAVVFTSLPLDATLLGLDPVRLPADGRVPVFREGDVMVVAHTAETTVPSPQAGGVLQLGRDQQAEIKVVDANAVELASAGYSVDLERGRVTWANPLVLQDAEGNPLTLPLVVRDRVEHMTLCTEVQVNGELGISSPLPWDLPAGETLASSALSWGDLQARLHHWFTQRTWDIGSPNWTDEPKGDGTTANYNSLAYPPLIANRGAIDAKWALVFNSSTSFSVVEEKLGVIANGTTTTDTAPINPETNTPYFTIRKEGWGSGWAAGNAVRFNTDSCLGPMWIVRTVLSGKGTVEDDEFHLQIRGDAD
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 124673,95330 Da
isoelectric point:5,05091
aromaticity:0,06932
hydropathy:-0,09603

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWQ71937.1
1 1183
Domain Start End Length (AA) Confidence
N-terminal 1 650 650 0,8640
Central domain 651 874 225 0,2305
C-terminal 875 1183 308 0,2501
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-650
Central
651-874
C-terminal
875-1183

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Lodos
[NCBI] 		3097004 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWQ71937.1 [NCBI]
Genbank nucleotide accession
OR683405 [NCBI]
CDS location
range 31915 -> 35466
strand +
CDS
ATGACGATCACCGTCGATGATGTAAAGCTGCTGAAATCCCAGCGCCTCACCGATGAGGACGACGGCGGCGGCCGTGCCACCGGGCAGGCCGTGGTGGATCGCGAGATCAACAACCTGTTTCCCGATATCTCGCGCCTGGACCGGACCATCGGCCGGATCAACCTGCGCAAGGCCTTCGCCGGCATCAGCTCGAACAGCGCCGAGCCGTACCTGGGCGCTCATGCCATCGTCACGCGGGCGCCGGCCGATCCGCGTGTCTCGGTGCTGCTGTTCAACACCGGCAGCCAGACTGATGAGCGCCGCGACGCGCGCAACGCCATCGAGTCCTTCGTGGTGCCGGCCGTGTCCGCCTCGTTCGAACTGCTGGGCAACCAGTTGCAGGGCCAGCGCGCCATCGCTTGCGTGCAGCGCGAAGAACAGCGGCTACCCGAGATTGGCGAGGTCTATCAGTTGGTGTTCGAGTCGCGCTCGCAGTATGTCCGCATCACCGACGTCGAGGCGCGGCTGGAACAGTTCGCCCACGACTACGGCAACGGCAACTTCGTGAACTTCACCCGGCGCCGGCTGGACCTGTCGATCAGCGCGCCGCTGGGCGCGACCTTCCCCGGCGGCCAGGTGACGCCAGGCGGCACCACCAGCCCGAAAAGCCAGGTGCTCAGCACCCAGGTCGCCGATGCCGCGCGGTACTACGGCATCAGCCCTCTGGCCGAGGCTGTCAGCCGCGGCGCGCTGAGCCTGCGGGTCAAGTCGGTCTATTCCCAGCTGGTGCCCAGCACCACCCGGGAGAACGCGCTGGTCGACCAACTGGCCGGCTACCAGCGGCGCCTGTTCGCTGCGGCCGGGCCGGCGCGGACGGTCAACCTGAATGTCGCGAACATAGGCAGCGGCAGGTCGCGGACGTTCCTCGGCACCGGCTGCGCGCCGGGTTCGCTGTCGCTGAGCGCCGGCGGCGGTGTGTTCGCCGACGACCGCAAGGGAGGCCTGCGCTACATCAGCGGTTCGAACTGGATTGCCAGCGGTACCGTCGACTACGAGAGCGGCGCAATCGAGATGGCGGCCTCCGGCAGCGGCTGGAGCGGGACAGCGAGCGCCACCTACCAGCCTGCCGCGGCGGCGACGGGCGAAGCGGTGACCGGGGAGATCCCTATCGAACTGGGCAACCGCGGCTTCGTCTACACCCTGTCGCTGTCCGAAGCGCCGCCCCAGCCGGGCACCCTGGTGGTCTCGTTCCTCGCCCTGGGCAAATGGCAGGAGATCCGCGACCAGGGCAACGGCGAATTGGCCGGGGAAGGCACCGGCACGGTGGACTTCGCGACCGGCTCGGTATCCATCACCCTGAGCGCGCTGCCGGACGTGGGGAGTTCGCTGATCTACGCCTACGTCGGGCAGAACGATGCGGCGCTGACCCAGCGCACCGGCACCAGCGTGCAGGCGCGTGCGCGGATCAACCGGACGTTGCCGCACCAGGGGCTGTTGCCCGGCTCCTACAAGGCGACGTTCAAGGTCGGCGGGGTAGAGCGCACCGTGCTCGATAGCGGCAACGGCTCGCTCAGCGGTACCGTTGGCAGCGGCCAGATCAACTATGCCGACGGCAAGGTCAGCATGGAATTGAGCGCCACCCCGGATGCCGGGAGTGGGATCGTGCATACCTACCAGCAGGGCAGCGTGACCGACAGCCCGCTGGCGGTGACCTCCGACAGCACCGGCATGTGCATCGGCACTCTCCCCGGGGCGCCGCTCAAGGCGGGCAGCGTGCGCCTATCGTGGATCACCAAGCGTCGCCAGGCGGCACCGACCCTCGGTGCTGACATGGGCACCGGGGCGCTGCCGATCTTCGAATCGGAGATCACCGTGGACAACTCGGTGACCGACGACGCCGCCGGCGGCTGGGCCGGGCGCGCCGGGACGATCAACTACGAGACCGGCGAATTCAGCCTGAAGGTGGCCGGCAACTACGTGTTCAAGGAGTACACCTACTACACCGACACGGTCGACAACTTCGGTATGAAGAAGCTGCGTCTGGTGGCCACCGATACCACGTTGCTGGAGGGGTTCGGCGGCACGCTGAGCGTGCGCGCGCAGAGCCGCGGCGTCGAGTACGGCGAGCAGACCGATTCGCAGACCGTCGCTCCGGTGACCCTGGACCTGTTGCCTGGTGTGGCCGAGCCGATCCTGCCGGGCTCGCTGGTGTTCACCTGGGCCGGCGAGGTCTACGTCGACCGCTCCGGTGTGCTCTACAAGAACATCAACAGCAGCACCAACGCCGGCATCGCCGTCGGCTCGGTGGACTACGCCGGCCGTACCGCGACGCTGAATACCTATGGCTCGGGGGCGGGGCCGACGGTCACGCTGCTGGCCTGTCTGACCACCAACGCCGGCTTCAGCGTCACCAGCATGACCTTCCGCACGCCGGGGGCGCCGCTGCGTTCTGCGAGCCTGCAGGTGACGGCGGTTCGCCTGGATACCGCGCAGATCGTGACCACCACGGCGGACGCGAACGGTAAGCTCAATGGCGCGGTGATCAAGGGTAGCGTCGATATCGTGACCGGCATCGTCCGGCTGCGCTTCACCAGCAATCTGGAGGACACCACCGGGGCCAGCGATATCCCGGTGATTCCGCTGCTGCTGCGCTACAACGCGGTCGTCTTCACCTCGCTGCCGCTGGACGCCACCCTGCTGGGCCTGGACCCGGTGCGACTGCCGGCGGACGGGCGGGTGCCAGTGTTCCGCGAGGGTGACGTGATGGTGGTTGCCCATACCGCCGAGACCACGGTGCCGAGTCCTCAAGCTGGCGGCGTGCTGCAGCTCGGCCGCGACCAGCAGGCCGAGATCAAGGTGGTGGACGCCAACGCGGTGGAACTGGCCTCGGCGGGCTACAGCGTCGACCTGGAACGCGGCCGGGTGACATGGGCCAACCCGCTGGTCCTGCAGGATGCCGAGGGCAACCCGCTGACCCTACCGCTGGTGGTGCGCGACCGGGTCGAGCACATGACCCTCTGCACCGAGGTCCAAGTGAACGGCGAGTTGGGAATCTCCTCGCCGCTGCCCTGGGATCTGCCGGCGGGCGAAACGCTGGCGTCCAGTGCGCTGAGCTGGGGCGACCTGCAGGCGCGGCTGCACCACTGGTTCACCCAGCGGACCTGGGATATCGGCTCGCCGAACTGGACCGACGAGCCCAAGGGCGACGGGACCACCGCCAACTACAACAGCCTCGCCTATCCGCCGCTGATCGCCAACCGCGGTGCGATCGATGCGAAGTGGGCGCTGGTGTTCAACTCCTCGACCAGTTTCAGCGTGGTGGAGGAGAAGCTGGGGGTGATCGCCAACGGCACTACCACCACCGATACGGCGCCGATCAACCCGGAGACGAACACGCCGTACTTCACCATCCGCAAGGAGGGCTGGGGCAGTGGCTGGGCGGCCGGCAACGCGGTGCGCTTCAACACCGACTCGTGCCTGGGGCCGATGTGGATCGTGCGGACGGTGCTGAGTGGCAAGGGCACCGTCGAGGACGATGAATTCCACCTACAGATCAGAGGAGACGCGGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9b30670ce23c330772c8d1cc35641a5aa97d3a35e211009d8c7809ecf0c686c4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank