Protein

View in Explore
Genbank accession
YP_010844651.1 [GenBank]
Protein name
baseplate protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAGKSGLDMLLMQYSDSPNLRAYIQIFLDELKLVQDAQEESVKYRYLADSFGVMVDDIAYLIGASRTIYGAAPLGYFGFYSDPSAFPAGDDNNPGVGGVLKSDSDRDSGDFIRTDTQLKDAIRARIRKIVGSCTIEELIVYVDLVLGRNLNLEIVEGFQTLHYQVHNTLSVAEKVLLAYMLPDFKPVGISITLADNGGAIDLPYVSRVYPPENQ
Physico‐chemical
properties
protein length:214 AA
molecular weight: 23586,50460 Da
isoelectric point:4,53600
aromaticity:0,09813
hydropathy:-0,01776

Domains

Domains [InterPro]
IPR021283
TAS
8–191
IPR021283
YP_010844651.1
1 214
Architecture
TAS
TAS 8-191 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage PYps23T
[NCBI] 		2801356 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus PYps23T
Host Yersinia pseudotuberculosis
[NCBI] 		633 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010844651.1 [NCBI]
Genbank nucleotide accession
NC_079178 [NCBI]
CDS location
range 44844 -> 45488
strand +
CDS
ATGGCTGGTAAATCTGGTTTAGATATGCTGCTAATGCAGTATAGCGATTCTCCAAACTTACGGGCATACATCCAGATTTTCCTGGACGAGTTAAAGCTCGTTCAAGATGCTCAAGAAGAGTCTGTTAAATATCGATACCTTGCTGATTCATTCGGCGTCATGGTTGATGATATTGCATATCTCATTGGTGCCAGCCGTACTATCTATGGTGCTGCACCACTTGGGTACTTCGGCTTCTATTCTGACCCAAGTGCATTCCCTGCCGGAGATGACAATAATCCTGGCGTTGGTGGTGTCTTGAAGTCAGATAGTGACCGGGACTCTGGTGACTTTATTCGTACCGACACTCAGCTTAAAGATGCGATACGTGCCCGTATTCGTAAGATTGTCGGAAGCTGTACAATCGAAGAACTGATTGTTTATGTAGACCTTGTTCTGGGTCGTAATTTGAATCTTGAGATTGTTGAGGGATTCCAAACACTACACTACCAAGTGCATAACACATTGTCAGTTGCTGAGAAAGTCTTGTTGGCATATATGCTCCCAGACTTTAAACCTGTTGGCATCTCCATAACTCTTGCAGACAATGGTGGTGCTATTGACCTTCCATATGTTTCTAGAGTTTATCCACCGGAGAACCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6bbcf8616540f55884a2112e54b7bbca2e6f144ee50290503ce2acc1faba6407
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7829
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Yersinia pseudotuberculosis phages Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank