Protein

View in Explore
Genbank accession
YP_009805599.1 [GenBank]
Protein name
straight fibre tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MISNNAPAKMVLNSIMTGYTMAYIQHSIYTDYDVIGRSFWLKLGEEVDRRDFTGIDTFFVMINNLTPSTTYQVQGAFYDSIIDSELLNAKIGINLSNETNFKTKEKPIIVAARSESEPVDVGVGAPIVVVETTGEASYCTIELKSTATEDSPWTKYYIGALGSTIKFGGVPIGDYKIRISGQVTMPDGATVDSSGYYEFPNILTVAYNFVPPTAPIDIVFKAARIADGKERYDVRIEWDWERGAGANVREFLVTYINSEEYAKTGWAKAQKINVGAARAATIISFPWKVEHTFKVSSIAWGPNKQDITESAPVTFILNEDTPLDNSFVNETGIDVNYAFIKGSMKDGEIWRQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGTTLRISSGVVIGTPNGDVDIGTGLQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNKLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSMGIPGLGGWDDGQANAFFQNNFGKPPVKYDVLTQFNSNAPQTAFTRQWNGTGWINPAMVLHGNMIVNGTVTADKIVAGNAFLSQIGVNIIYDRNAALSGNPEAYYKMKIDLNSGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74899,40190 Da
isoelectric point:4,97133
aromaticity:0,10365
hydropathy:-0,23431

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
103–197
IPR057551
YP_009805599.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009805599.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 408 408 0,8815
Central domain 409 616 209 0,1709
C-terminal 617 685 68 0,4928
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-408
Central
409-616
C-terminal
617-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S132
[NCBI] 		2231355 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus S132
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009805599.1 [NCBI]
Genbank nucleotide accession
NC_048010 [NCBI]
CDS location
range 18407 -> 20464
strand +
CDS
ATGATTTCGAATAATGCACCAGCCAAGATGGTCTTAAATAGTATTATGACTGGGTATACGATGGCGTATATCCAGCATTCTATCTATACCGACTACGATGTTATCGGTAGATCATTCTGGCTTAAACTTGGCGAAGAAGTGGATAGAAGAGATTTCACTGGGATCGACACTTTCTTTGTTATGATCAATAATTTAACTCCCTCAACTACCTATCAGGTTCAGGGAGCTTTTTATGACTCAATTATTGACTCAGAACTTTTAAATGCAAAAATTGGTATTAACCTCTCTAATGAAACTAACTTTAAAACAAAAGAGAAACCAATAATTGTTGCAGCAAGGTCTGAGTCAGAACCTGTGGATGTTGGGGTGGGCGCACCGATAGTTGTTGTGGAAACAACTGGTGAAGCAAGTTACTGTACTATTGAGTTAAAAAGTACGGCCACTGAAGACAGTCCCTGGACTAAATATTATATCGGGGCTTTAGGTTCTACTATTAAATTTGGTGGAGTTCCTATCGGAGATTATAAGATCAGAATATCTGGTCAAGTAACTATGCCTGATGGTGCTACAGTTGACTCTTCTGGGTACTATGAATTCCCTAATATTCTAACTGTAGCCTATAACTTTGTTCCTCCTACTGCACCTATTGATATCGTATTTAAAGCTGCACGAATTGCTGATGGTAAAGAACGATATGATGTTAGAATTGAGTGGGATTGGGAACGTGGTGCTGGTGCTAACGTTCGTGAATTTTTAGTTACTTATATAAACTCCGAAGAGTATGCTAAAACCGGATGGGCTAAAGCTCAAAAGATAAACGTGGGTGCTGCTAGAGCTGCAACGATTATATCATTCCCATGGAAAGTTGAACATACCTTTAAGGTTTCATCAATTGCCTGGGGACCAAATAAGCAAGATATAACAGAATCAGCTCCTGTAACATTTATATTGAATGAAGATACTCCTCTAGACAACAGCTTTGTCAATGAGACAGGTATTGATGTTAACTATGCTTTTATTAAGGGCAGTATGAAAGATGGAGAAATCTGGAGACAGACATTCTTAATTGATGCAGCTACTGGTGCTATTAACATTGGTCTGCTAGATGAAGAAGGAAAAGCACCTATTTCTTTTGACCCTATAAATCGTGTTGTTAACGTTGATGGTAAAGTAATTACTAGAGATATTAACGCTGCGAACTTTATCATGACTAACTTGTCTGGTAAAGATAATCCAGCAATTTACACTCAAGGTAAATCTTGGGGAGATAATAACTCTGGTATTTGGATGGGTATGGATAATACCTCTGCCAAAGCTAAATTAGACATTGGTAATGCTACACAATGGATACGTTATGATGGTACTACTCTGCGCATCTCTAGTGGTGTAGTAATTGGAACGCCAAATGGTGACGTAGATATTGGAACTGGTTTACAAGGTAAGCAAACAGTATTTGTTTATAAGTTAGCAACATCTTTACCGGCCAAACCGCTAGAACAAGATTACCCACCTCCTGGTTGGTCAAAAACTCCACCTAATCGTACAGATATGACACAAAATATCTATGCGACTACGGGTACACTTGATCCAGTTACTAACAAACTTCTTGAAGGTACTAGCTGGTCTGATGTGGTGCAGTGGAGTGGTACTGAAGGTACTATAGGACATGATGGACAGCGTGGTCCGGGGATGTACTCTATGGGTATTCCGGGACTAGGTGGTTGGGATGATGGACAAGCTAACGCATTCTTCCAAAATAACTTTGGAAAACCTCCGGTTAAATACGATGTTCTAACACAATTTAACAGTAATGCTCCACAAACAGCATTTACCCGTCAATGGAACGGGACTGGATGGATTAACCCTGCAATGGTTCTTCATGGCAATATGATTGTTAATGGGACTGTTACTGCGGATAAGATTGTGGCAGGAAATGCCTTCTTATCGCAAATCGGTGTTAATATAATCTACGATAGAAATGCTGCATTATCAGGGAACCCTGAAGCATACTACAAGATGAAGATAGACCTAAATAGTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
05ee464572c47d3606aa1b0fb892072252c9c55148a9e332772c9a255d07004f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7760
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50