Protein

View in Explore
Genbank accession
YP_009822718.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAFEKFPPTNASEAVAVFKQDAIIVHDVAHGDENAEVLTENGLIPSIAKFIKDTNERIGDGLVNIEHSVTTNRDAVDSHPISAITGLQTALDAKVDTSAFGTAASADLTTSATDTTAGRVTKVGDGGILSSSVPSVVLNIALTSGIYRYGSSDPQSPNAELGETLLSGVIVVLPTTSAAVLQVAYSNSTNAGLRRIYIRYGTTDSWSTWNKQLAVGDYGLGTEFLAAAATRPPSNDANLITVTGFYGTDSVTLGLPALAGGASTLRCGLLALATGSDDFQFIFTSRNTDQVFYGRKVAAGAITWNELIHTGNESTALAKDYAISVAADATLEINKKYYIAGGTTYTLPSGTGLPNGTAISVRRRISVVPTIQTTGGQTIRIGTGDIAYQTDTSITFDINAELIFVWTGSVWEI
Physico‐chemical
properties
protein length:413 AA
molecular weight: 43248,72460 Da
isoelectric point:4,74648
aromaticity:0,07506
hydropathy:0,06925

Domains

Domains [InterPro]
DC_1143
STR
8–215
DC_1143
cd19958
STR
138–212
cd19958 DC_0952
YP_009822718.1
1 413
Architecture
STR
RBD
STR 8-215 | RBD 216-413
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rheinheimera phage Barba5S
[NCBI] 		2849599 Uroviricota > Caudoviricetes > Barbavirus >
Host Rheinheimera sp. BAL341
[NCBI] 		1708203 Pseudomonadota > Gammaproteobacteria > Chromatiales > Chromatiaceae > Rheinheimera >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009822718.1 [NCBI]
Genbank nucleotide accession
NC_048187.1 [NCBI]
CDS location
range 72513 -> 73754
strand +
CDS
ATGGCTTTTGAGAAATTCCCACCCACTAACGCTAGTGAAGCTGTTGCTGTGTTTAAGCAAGATGCAATTATTGTACATGATGTTGCTCATGGTGATGAGAATGCAGAAGTATTGACAGAGAATGGATTAATACCTAGTATTGCCAAATTCATTAAAGATACTAATGAGCGTATTGGTGACGGTCTTGTTAATATAGAGCACTCGGTAACAACAAATCGTGATGCAGTGGATAGTCACCCTATTTCTGCCATTACTGGTTTACAGACCGCATTAGACGCCAAAGTCGATACTTCTGCATTTGGCACAGCAGCATCAGCAGACCTCACTACATCAGCAACAGATACAACCGCTGGTCGTGTTACTAAAGTTGGTGACGGTGGCATCCTATCAAGCTCTGTCCCATCGGTCGTATTAAATATAGCTTTAACAAGTGGTATTTATCGCTATGGTTCATCTGACCCCCAATCACCGAACGCAGAATTAGGCGAGACACTTTTAAGTGGTGTTATTGTTGTTCTACCAACGACTAGCGCCGCTGTACTGCAAGTGGCCTATTCAAATTCAACCAATGCCGGTCTTAGACGCATCTATATCCGATATGGGACAACCGATAGCTGGTCTACGTGGAATAAGCAGTTGGCAGTCGGAGACTACGGATTAGGCACAGAGTTCTTAGCTGCCGCAGCAACGCGCCCACCAAGCAATGACGCCAACTTAATAACCGTAACGGGTTTTTATGGAACTGACTCAGTAACACTTGGTTTACCAGCGTTAGCTGGTGGGGCAAGTACGTTACGGTGCGGATTGTTAGCATTAGCAACAGGCAGCGACGACTTTCAGTTTATATTTACTTCCAGAAATACGGATCAGGTTTTTTATGGGAGAAAGGTTGCAGCAGGCGCGATAACTTGGAATGAGCTAATCCACACAGGGAACGAATCAACAGCATTAGCAAAGGATTACGCTATCTCAGTAGCAGCCGATGCTACGCTGGAGATAAACAAAAAATATTATATCGCAGGTGGTACGACTTATACGCTGCCAAGTGGAACGGGACTGCCTAACGGTACAGCGATTTCTGTTAGACGTAGAATTTCGGTTGTGCCGACTATACAAACTACAGGTGGTCAGACAATCCGCATAGGTACTGGCGACATCGCCTACCAGACGGACACATCAATCACATTTGACATTAACGCAGAGTTGATATTCGTTTGGACTGGCTCAGTATGGGAGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7129bb2605c8922d090b657d0080a0273ed97637f6f4e8af8a591ed4e0405d1e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and seasonal variations among aquatic phages infecting the Baltic Sea Gammaproteobacteria Rheinheimera sp. bal341 Nilsson,E., Li,K., Fridlund,J., Sulcius,S., Bunse,C., Karlsson,C.M.G., Lindh,M., Lundin,D., Pinhassi,J. and Holmfeldt,K. 2019-09-15 — GenBank