Protein

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Genbank accession
UJD21501.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRFAEQGSVQINGWSSESEGLQKRPPIIHLKTLGPAGYVGAQPYVHLINRDEFEQYFVVFTGEDIKVFDLDGKEYQVRGDRSYVRTANPREDLRMVTVADYTFVTNRKVVVQSNDQSVNLPGFKDQGDALINVRGGQYGRRLSIEFNGAERAAVQLPDGSQPAHVNEVDGQAIAEKLAVQLRNNLGNPNNEQDPNKWRFNVGPGFIHILAPNNDNVWGLQTKDGYADQLINPVTHYAQSFQKLPINAPDGYIVKIVGDTSKTADQYYVRFDLNRKVWVETIGWNTRTHLHYHTMPWALVRASDGNFDFKYLEWGARTVGDDTTNPYPSFTGQTINDIFFFRNRLGFLSGENIILSRTSKYFNFFPASVSNYSDDDPIDVAVSHNRVSTLKYAVPFSEELLLWSDQAQFVLTASGILSSRSVELNLTTQFDVQDRARPHGVGRNVYFASPRASFTSINRYYAVQDVSSVKNAEDMTAHVPNYIPNGVFSISGTTAENFAAILTSGAPNRVYIYKFLYIDEEIRQQSWSHWDFGDNVTVFAAQVINSTMTVLMSNEHAVWMGRLHFTKDSIDLPGEPYRLYIDAKRKYTIPAGTYNDDTYQTSISLSTIYGMNFTRGRVSVVFPDGKIVEIDQPINGWSSDPILRLDGNQEGQVVYIGFNIPFTYTFSKFLIKKTAEDGSTATEDIGRLQLRRAWVNYEDSGAFTIRVNNLSREFIYTMAGARLGSDNLRVGGSNIGTGQYRFPVVGNAQTNIVTIESDASTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:801 AA
molecular weight: 89885,31820 Da
isoelectric point:5,85381
aromaticity:0,11610
hydropathy:-0,36617

Domains

Domains [InterPro]
IPR058003
TTP
1–801
IPR058003
UJD21501.1
1 801
Architecture
TTP
TTP 1-801
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD21501.1
1 801
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9916
Central domain 144 342 200 0,0718
C-terminal 343 801 458 0,1704
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-342
C-terminal
343-801

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SAg-RPN15
[NCBI] 		2910948 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD21501.1 [NCBI]
Genbank nucleotide accession
OL800605 [NCBI]
CDS location
range 35463 -> 37868
strand -
CDS
ATGGCTCTCATTAGTCAATCAATCAAGAACCTCAAGGGTGGTATCAGCCAACAGCCAGATATTCTCCGGTTCGCTGAACAAGGTAGCGTACAGATTAACGGTTGGTCTTCTGAGTCAGAGGGTCTCCAGAAGCGCCCACCAATTATTCACCTTAAGACACTTGGCCCTGCTGGGTATGTGGGTGCGCAACCTTACGTGCATCTTATCAACCGTGATGAGTTCGAGCAGTATTTTGTTGTGTTCACTGGTGAAGACATTAAGGTATTCGACCTCGACGGTAAGGAGTACCAAGTACGTGGAGACCGCTCTTATGTGCGCACAGCTAACCCACGAGAAGACCTTCGGATGGTAACGGTGGCAGATTATACCTTTGTGACTAACCGCAAGGTGGTTGTGCAGAGTAACGACCAATCGGTCAACCTTCCGGGTTTTAAAGACCAAGGTGATGCGCTGATTAATGTTCGTGGTGGACAATATGGGCGTAGATTATCAATCGAGTTCAACGGGGCTGAGCGTGCTGCTGTGCAACTACCAGATGGTTCACAACCAGCACATGTTAACGAGGTGGACGGTCAGGCTATCGCTGAGAAGCTGGCGGTGCAGTTGAGGAACAACCTTGGGAATCCAAACAACGAGCAAGACCCGAATAAGTGGCGCTTCAACGTTGGCCCCGGATTCATCCATATCCTTGCGCCAAATAACGATAACGTTTGGGGACTACAGACTAAGGATGGTTACGCAGACCAGCTAATCAACCCTGTAACCCACTACGCTCAGTCGTTCCAGAAGTTGCCTATTAACGCTCCAGATGGGTACATTGTGAAGATTGTAGGTGATACCTCAAAGACTGCCGACCAGTATTACGTTAGGTTCGACCTCAACCGTAAGGTATGGGTAGAAACAATCGGCTGGAACACAAGGACTCACCTACATTACCACACGATGCCTTGGGCGCTGGTACGTGCTTCTGACGGGAACTTTGACTTCAAGTACCTTGAGTGGGGTGCTCGTACTGTGGGCGATGATACAACTAACCCATACCCATCGTTTACCGGACAGACAATCAACGATATTTTCTTCTTCCGTAACCGTTTAGGCTTCCTTAGTGGGGAGAACATCATCTTGTCGCGCACCTCGAAATACTTCAACTTCTTCCCGGCCTCCGTGTCAAACTACTCCGACGATGACCCAATCGACGTTGCCGTTAGTCACAACCGGGTGTCAACCTTGAAGTATGCCGTTCCGTTCTCCGAAGAGTTACTCCTATGGTCTGACCAAGCGCAGTTCGTTCTGACAGCCTCTGGTATCCTTTCGAGTCGCTCCGTAGAGTTGAACCTTACGACTCAGTTCGACGTGCAAGACAGGGCACGCCCACATGGTGTAGGACGTAATGTATACTTTGCATCACCTCGCGCTTCCTTCACATCCATTAACCGATACTATGCGGTACAGGATGTAAGTTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTTCCGAACTACATACCGAATGGGGTATTTAGTATCTCAGGAACAACCGCTGAGAACTTCGCGGCTATACTTACGAGCGGAGCACCTAACCGAGTGTATATCTACAAGTTCCTCTACATTGACGAGGAAATCAGGCAGCAGTCGTGGTCTCATTGGGACTTTGGGGACAACGTTACGGTGTTCGCAGCACAGGTCATAAACTCAACAATGACAGTATTGATGAGCAACGAACATGCTGTGTGGATGGGGCGCTTACACTTCACGAAGGACTCCATAGACCTTCCGGGAGAACCTTACAGGTTGTATATCGACGCTAAGAGGAAGTACACCATCCCTGCTGGGACATACAATGATGATACCTACCAGACGTCCATAAGCCTCTCAACGATTTACGGGATGAACTTCACTAGGGGTAGAGTGTCTGTGGTCTTTCCTGATGGGAAGATTGTAGAGATAGACCAGCCAATCAACGGGTGGAGTAGCGACCCAATACTGAGACTTGATGGGAACCAAGAGGGACAAGTAGTCTACATTGGGTTCAACATCCCGTTCACTTATACGTTCTCGAAGTTCCTCATTAAGAAGACTGCTGAGGACGGCTCGACGGCTACCGAGGATATCGGACGTTTACAGCTTCGGCGTGCATGGGTAAACTATGAGGACTCTGGAGCGTTCACCATCCGTGTGAACAACCTGTCCCGTGAGTTCATCTACACGATGGCTGGTGCTCGCTTGGGTTCTGACAATCTGCGTGTTGGTGGGTCGAACATTGGCACAGGGCAGTACCGCTTCCCGGTGGTGGGTAATGCGCAGACGAACATAGTAACTATCGAGTCAGACGCATCAACCCCATTGAACATCATTGGGTGCGGCTGGGAGGGTAACTACCTTCGTCGTTCTTCGGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2d008b3748072989672e9f84fc9820aaece5be496156fc804d379ef81c3adbda
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Salmonella phage vB_SAg-RPN15 Imklin,N., Sriprasong,P. and Nasanit,R. 2022-01-10 — GenBank