Protein

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Genbank accession
ALY07047.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MLGPKKFRASSGLDASGKKVVNVETTQLNQPFDATNVEFFIRENTVQEYDPTRKYETTGFVVKFNNRFYQNLTSIVTPEPFNDSKWRALSTDVKYRRVLNTGGSNGLLRVGDFILSNVVAQDAIYTLPLDTELNTPTLGDSVSIYDEAGSCNEFELVISGNGKLINGKTSYRITVPRSRTIFVYNGNQWIANTVESETQRGKLVSVAQYTPTRQFIQLAAGDEIMRESRFAGDLVMRLPRYANHGDMIYTADLDALNHRNRAILDVHPESGHTITIKHDRPTVTRAISDAGGGFGRAIFDESVNTWRLFDGDLQPRWRVIQNDYVCENRDLLSPYSEDSNKTINITLPVRIAGGNSVSITMAHMIAGSKIKLVIPTTATDSFIFGDVDTLETPQLSTVIEKYQDKSQLLSKEIILTSDGSDRTWTFVYQEKTMFFPTQNVWFNTVVERTDYRVDSSNPERHGIAAIATQSEVNKNHEDIDGGKNKRDSEAFVTPETLANKTSTETRRGIARFATSTEANATSGSGESWDGVILTPKKLNDRIATTSRRGVARLATQAQANAMSGSGETWTSLIITPQTLDGRKSTETQTGITQQVIQSGNKQTARTTKGSGIHDYDEHYRYVTPKTLFEKVSTETSQGMGFVATQAETNVGTVDNVNGPLFITASKLHARQATTTLTGLTRAATNAETLSNTPTVGNNIHVTPSELVKRTATETRWGLAETATQVEVDAGTLHDRYFVTPKTFSEWLKGTRIIVDETSGLRISGNLWDGHSINIEQSSATQRGTLALATQSEVNGSSVSDKAITPQTLHGRTATTSRTGIAALATQSEVDAGTNNTKIVTPQTLRVVSDERYVNRTGDSMNGSLTINHSDGLVLTDPNSVESWGALRVGARTDSAGNTTQARETSIWTRHQSNSVGARNINTVFKDSGGFYCYGNGSNNLLFDLHGVNGSISNKNGVYSRLDVGPLYLRPNGQNSSTNQATLSTNGIFTSQNFVSLSGEYQSDVGKVLRLIPANDATKSVDITSGGNVTTKGNLSVATDVGVGRDLNVTRNANVTGTLIVTDNATFKNNVSFEKDVTVTGKTTLNGLLEINTPVININRVAGNSLVVNMGTIGGISFDSQGDMSVSPDRSGGVIKIRPSGLSNATNEILINSTGMTLKTNQRITAAATPTNANHLANKGYVDQAIDDVTLNAGNRVSKLGDTMTGPLVVNSSEAIVANGTVSVKDLLTVSQLRIDVGNGEFVEIRPNRQNYTIEFVWISN
Physico‐chemical
properties
protein length:1260 AA
molecular weight: 136836,41170 Da
isoelectric point:6,31341
aromaticity:0,06429
hydropathy:-0,39992

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALY07047.1
1 1260
Domain Start End Length (AA) Confidence
N-terminal 1 985 985 0,7186
Central domain 986 1184 200 0,4304
C-terminal 1185 1260 75 0,6179
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-985
Central
986-1184
C-terminal
1185-1260

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VmeM-32
[NCBI] 		1775142 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio metschnikovii
[NCBI] 		28172 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALY07047.1 [NCBI]
Genbank nucleotide accession
KU160494 [NCBI]
CDS location
range 37481 -> 41263
strand +
CDS
ATGCTTGGACCCAAAAAATTTAGAGCCTCAAGTGGGTTAGATGCCAGTGGTAAGAAAGTGGTGAATGTTGAGACTACTCAATTAAACCAACCATTTGATGCGACTAACGTTGAATTCTTTATTCGAGAAAACACAGTACAAGAATACGACCCAACCCGAAAATATGAAACAACTGGTTTCGTAGTAAAATTTAATAACAGATTTTATCAAAACTTAACATCGATTGTTACACCCGAACCGTTTAATGATTCGAAATGGCGAGCACTATCCACGGACGTGAAATATCGTAGAGTATTAAACACTGGTGGAAGTAACGGTTTGTTACGAGTTGGCGACTTCATATTATCAAATGTGGTTGCTCAGGACGCAATTTATACATTACCACTCGATACAGAATTAAACACGCCAACACTGGGTGATTCGGTATCGATATATGATGAAGCTGGTTCGTGTAATGAATTTGAATTGGTTATTTCTGGTAATGGTAAATTAATCAACGGTAAAACATCTTATCGAATCACTGTTCCCCGTTCTCGAACTATTTTTGTTTATAATGGTAATCAGTGGATCGCTAACACTGTTGAATCGGAAACACAACGTGGCAAATTAGTATCTGTTGCTCAATACACACCAACACGACAATTTATTCAATTGGCCGCTGGTGATGAAATCATGCGGGAAAGTAGATTTGCTGGTGATTTGGTCATGCGACTGCCGCGATATGCTAATCATGGTGACATGATTTATACGGCCGATTTGGATGCACTTAATCATCGAAATCGAGCAATATTAGATGTTCATCCAGAAAGCGGTCACACGATTACTATAAAACACGATAGACCCACTGTGACAAGAGCAATCAGTGATGCTGGTGGCGGTTTCGGTAGAGCCATATTCGATGAATCTGTGAACACATGGCGATTATTTGACGGAGATTTACAACCTCGCTGGAGAGTCATTCAAAATGATTACGTGTGTGAAAACAGAGATTTATTATCGCCTTATAGTGAAGATTCAAATAAAACGATTAATATAACACTTCCGGTTCGTATTGCTGGTGGTAATTCTGTTAGTATCACCATGGCTCATATGATTGCTGGCAGTAAAATCAAACTAGTGATTCCAACTACAGCTACTGATTCGTTTATTTTTGGTGATGTCGATACGCTAGAAACTCCACAATTATCTACCGTGATAGAAAAATATCAAGATAAAAGTCAACTACTATCTAAAGAAATAATATTGACCTCTGATGGTAGCGATAGAACTTGGACATTTGTGTATCAAGAAAAAACAATGTTTTTCCCAACTCAAAATGTTTGGTTCAATACAGTCGTGGAACGAACAGATTATCGTGTAGATAGTTCTAACCCCGAACGACATGGTATTGCTGCTATAGCTACACAATCAGAAGTTAACAAAAATCATGAAGACATCGATGGTGGTAAAAATAAACGAGATAGTGAAGCATTTGTTACGCCAGAAACACTTGCTAATAAAACGTCAACAGAAACGAGACGCGGTATTGCTAGATTTGCCACATCGACAGAAGCAAACGCAACTAGTGGAAGCGGTGAATCGTGGGATGGTGTTATTTTAACGCCGAAGAAATTAAACGATAGAATCGCTACTACTTCGCGAAGAGGCGTAGCTCGTTTAGCAACGCAAGCGCAAGCTAATGCTATGAGTGGAAGTGGCGAAACATGGACCAGTTTGATTATCACACCACAAACACTGGATGGTAGAAAATCAACAGAAACGCAAACAGGCATAACTCAACAAGTTATTCAATCTGGTAATAAACAGACAGCGAGAACAACAAAAGGTAGTGGCATTCACGATTACGATGAACACTACAGATATGTGACACCTAAAACATTGTTCGAGAAAGTGTCCACTGAAACGAGTCAAGGTATGGGGTTTGTTGCAACTCAAGCAGAAACGAATGTCGGTACAGTTGATAATGTTAATGGACCATTATTCATAACGGCAAGTAAACTACACGCTAGACAAGCAACAACAACATTAACGGGTTTAACTCGTGCAGCAACCAACGCCGAGACTTTATCGAACACACCAACTGTTGGAAATAATATTCACGTTACGCCGAGTGAATTAGTCAAGCGTACAGCGACAGAAACACGTTGGGGTTTAGCTGAAACTGCAACACAAGTCGAAGTTGATGCCGGCACGTTGCACGATAGATACTTTGTGACTCCAAAAACATTTAGCGAATGGTTAAAAGGCACAAGAATTATTGTTGATGAAACGAGTGGTTTAAGAATATCTGGTAATTTGTGGGACGGACACTCAATTAATATTGAGCAATCTAGTGCAACTCAAAGAGGTACGTTGGCATTAGCAACTCAGAGTGAAGTTAACGGTTCGAGTGTGTCTGATAAAGCAATTACACCACAAACATTACACGGTCGAACTGCCACAACATCTAGAACAGGTATTGCCGCATTGGCAACACAATCCGAAGTTGATGCTGGAACGAATAACACTAAGATTGTTACTCCTCAAACTCTTCGTGTGGTATCGGACGAACGATATGTTAACCGAACTGGCGACTCGATGAATGGTAGCTTGACCATCAATCACTCAGATGGATTAGTTCTAACTGACCCAAATAGTGTTGAAAGTTGGGGAGCATTACGAGTTGGCGCAAGAACCGATTCGGCAGGAAACACGACACAAGCCAGAGAAACCAGTATATGGACTAGACATCAATCCAATAGTGTTGGTGCGAGAAATATAAACACTGTATTTAAAGATAGTGGCGGTTTTTATTGCTATGGTAACGGATCGAATAATTTGTTATTTGATTTACATGGCGTTAATGGTTCGATATCTAATAAAAATGGTGTGTACTCTAGATTGGATGTGGGTCCATTATATTTGCGACCAAACGGACAAAATAGTTCAACCAATCAAGCGACATTATCGACTAATGGAATATTCACGTCTCAGAATTTTGTGTCGCTATCTGGTGAATATCAAAGTGATGTTGGAAAGGTATTGAGATTGATACCAGCGAATGATGCGACCAAATCGGTAGATATCACATCTGGAGGTAACGTAACAACAAAAGGCAATTTAAGTGTCGCAACTGACGTTGGTGTAGGTCGAGATTTAAATGTGACTAGAAATGCCAACGTTACTGGAACATTAATCGTGACCGATAACGCTACATTTAAAAATAATGTATCGTTTGAGAAAGATGTAACCGTTACTGGTAAAACAACATTAAACGGTTTATTAGAGATCAATACCCCAGTTATTAATATTAATCGAGTTGCTGGTAACTCTTTAGTCGTTAATATGGGCACAATTGGAGGTATTTCGTTTGATTCTCAGGGTGATATGTCAGTATCACCAGATAGAAGCGGTGGGGTTATTAAAATTCGTCCTAGCGGATTATCCAATGCGACGAATGAAATATTAATAAATTCTACTGGAATGACATTGAAAACCAATCAGCGGATTACGGCAGCGGCAACTCCAACTAATGCGAATCATCTAGCAAACAAAGGGTACGTCGATCAAGCAATAGACGACGTGACGCTAAATGCAGGTAATCGTGTTAGTAAACTAGGCGATACTATGACCGGACCTTTAGTTGTTAATTCGTCTGAGGCTATTGTGGCAAATGGTACTGTTAGTGTGAAAGATTTGTTAACTGTTTCTCAATTGCGGATTGATGTTGGTAATGGTGAATTTGTGGAAATTAGACCGAATCGACAAAATTATACAATTGAATTCGTTTGGATATCTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b1502885fc76ab7ca30b245e33d1f7f75d9321f02ef1bb8ac1e06038d95184c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5320
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50