Protein

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Genbank accession
XKC24407.1 [GenBank]
Protein name
straight fiber tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MISNNAPAKMVLNSIMTGYTMAYVQHSIYTDYDVIGRSFWLKLGESIDRRDYTGIDTFFVMINNLTPSTSYEIQGAFYDSIIDSELLEAKIGINLSNKTTFSTKRKPTITAARSEADPVDVGVGAPIVVIETTGEASYCTIELKSTQPSSSPWIKYYVGPLSPTIRFGGVPIGDYKVRISGQFTMPDGVTVDSSGYFEFSKVLTVEYNFVPPTAPSNITFKTARIADGKERYDLRVQWEWDRGAGANVREFVVSYIDSVEFKKTGWTKAQKINVGAAQAATIISFPWKIEHKFKVSSIAWGPDAQDVTDSAVQTFILNEDTPLDNSFVNETGIEVNYAYIKGKIKDGSTWKQTFLIDAATGAINIGLLDAEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDTKSGIWMGMDNTSAKPKLDIGNSTQYIRYDGTTLRISSEVVIGTPNGDVDLGTGMQGKQTVFIYKLGKSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNKLLEGTSWADVVQWSGTEGTIGADGQRGPGMYSLGIPGLGGWDDGQANAFFQNNFGSPPVRYDVLTEFNSNAPQSAFTRQWNGSGWINPAMVLHGDMIVNGTVTASKIVANNAFLSQIGVNVIYDRNAALSDNPEAYYRMKIDLQNGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74966,50320 Da
isoelectric point:5,21250
aromaticity:0,10511
hydropathy:-0,25956

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
XKC24407.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-196 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC24407.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 411 411 0,9365
Central domain 412 616 206 0,1015
C-terminal 617 685 68 0,4574
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-411
Central
412-616
C-terminal
617-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage HMD-P4
[NCBI] 		3374742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC24407.1 [NCBI]
Genbank nucleotide accession
PQ462666 [NCBI]
CDS location
range 83257 -> 85314
strand -
CDS
ATGATTTCAAATAATGCACCAGCCAAAATGGTCTTAAATAGTATAATGACTGGATATACAATGGCGTATGTCCAGCATTCTATATATACTGACTATGACGTTATTGGTAGATCTTTTTGGTTAAAGTTAGGAGAAAGTATCGATAGACGTGACTATACCGGTATAGACACTTTCTTCGTAATGATTAATAATCTGACCCCTTCAACCTCTTATGAGATTCAAGGGGCTTTTTATGATTCTATTATAGATTCAGAGCTACTAGAGGCTAAAATTGGTATAAACTTATCCAATAAAACTACCTTTAGTACTAAGAGAAAACCTACTATTACTGCCGCTAGATCAGAAGCTGATCCAGTAGATGTGGGTGTAGGTGCCCCTATAGTAGTTATAGAGACTACAGGAGAAGCTAGTTATTGTACTATTGAGTTAAAAAGTACTCAACCTTCAAGTAGTCCGTGGATAAAATATTATGTAGGTCCGTTATCCCCCACTATTAGATTTGGTGGTGTTCCTATTGGAGATTATAAAGTACGCATATCAGGGCAATTTACTATGCCTGATGGTGTAACTGTAGACTCCTCTGGATACTTTGAGTTTTCTAAAGTTCTTACTGTAGAGTATAACTTTGTACCTCCTACTGCTCCTAGCAATATTACCTTTAAGACTGCAAGAATTGCAGACGGTAAAGAGAGATATGATCTTCGTGTACAGTGGGAATGGGATAGAGGAGCTGGTGCTAACGTTCGTGAATTTGTTGTTTCTTATATAGATTCAGTAGAATTCAAAAAAACTGGATGGACTAAGGCCCAAAAAATTAACGTAGGTGCTGCTCAAGCAGCAACTATTATATCTTTCCCCTGGAAAATTGAGCATAAATTTAAAGTCTCCTCTATAGCATGGGGGCCAGATGCTCAAGATGTTACAGATTCTGCAGTACAGACTTTTATACTGAATGAAGATACCCCTCTTGACAATAGTTTTGTTAATGAAACCGGTATTGAAGTAAACTACGCGTATATTAAAGGTAAGATCAAAGATGGATCTACCTGGAAACAAACATTTTTAATAGACGCTGCTACCGGTGCTATTAATATAGGTCTTCTAGATGCTGAAGGAAAAGCACCAATATCTTTTGATCCTATTAAAAAGATAGTTAACGTTGATGGCAGTGTTATAACTAAAACTATCAATGCTGCTAACTTTGTAATGACCAATCTAACTGGCCAAGATAATCCGGCAATCTATACTCAAGGTAAAACTTGGGGAGATACAAAATCTGGTATCTGGATGGGAATGGATAACACTTCTGCTAAGCCAAAACTGGACATTGGTAATTCTACACAATATATTCGCTATGATGGTACCACTCTTCGTATATCTAGTGAGGTTGTTATAGGTACTCCTAATGGTGATGTAGATCTGGGTACTGGTATGCAAGGTAAGCAGACAGTATTTATCTATAAACTTGGTAAAAGCCTACCTGCCAAACCATTAGAGCAGGATTATCCTCCTCCTGGCTGGTCTAAAACACCACCTAACCGTACTGATATGACTCAGAATATTTATGCTACAACTGGTACTCTAGACCCTGTTACAAATAAATTATTGGAAGGTACTAGTTGGGCGGATGTTGTTCAGTGGAGTGGTACTGAAGGTACTATTGGTGCAGATGGTCAAAGGGGCCCTGGCATGTATTCCTTAGGTATTCCAGGTCTTGGAGGCTGGGATGATGGACAAGCTAATGCCTTCTTCCAGAATAACTTTGGTAGTCCACCAGTTAGATATGATGTATTGACTGAGTTTAATAGTAATGCTCCGCAATCTGCATTTACTCGTCAATGGAATGGTTCCGGTTGGATTAATCCTGCAATGGTACTGCATGGCGATATGATAGTTAACGGTACGGTAACCGCCAGTAAGATTGTAGCAAATAATGCCTTCTTATCTCAGATCGGTGTTAACGTTATTTATGATAGAAACGCTGCATTATCTGATAATCCGGAAGCCTATTACAGAATGAAGATAGACCTGCAAAACGGGTACATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3837ea5d313b221dcbc0194b9b0af797b593d09665a6187d1d92f8ef5dd03deb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7929
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50