Protein

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Genbank accession
GENB_d954a941dec1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAKTLQQYPTGQSQYRIEFDYLARPFVVVTLINSADQTQNKVLRVGADYTFLNATTLTMLASQTGFDIVQINRVTSSTPLVNFQDGSVLTAGDLTTSEVQAIHIAEEARDQTAEIAQTYSESAIQAAKDAQEVLDKILAMQAAGYSPVGTFESGANVTLPNQTVRLGTGSSTTFWRWDGQLPKTVPAASTPDSTGGIGVGKWVDVTDMTLRVQLAAADGYKLVGVVDNIIALRGIAPQTEGQLIKLRQHTAGTGTGGGTFRGTLNGSALVDNNGTVIKNSNNGAWVRVNAHVVNPLMFGALCRSGVSDHVALLQAAKATANKLDLLGLQYWCSDTVYFNDSAVGNKIRVTNGRLYVNTDIAANRPMIRMKNGQKLDHLWLDGGNQEYSKGITWEGASGEGFGGEIAFCDFRYFGNEAIGISGDYTARKFASRGFVHHCNFTGNGLKGIANSRCTIIANGVSDFTFDHLNVLDSLWGIYVRMDTSLADKARAGNNKITNSSFKGMGRNYTDWQGLRDAQGISVNRQWNLVIDNCVIRDYADNAIDNGSSRGSTITNIHAINCKDGVFIGDIDCDDYILANIYSDNCDRLLRVIMDGNIQADGTVANVLIDNCHARRSIYQGFYIGNTGAATRVTHVRISNSSYTGEVQTGTGSSPTGFEITGISSVQMIGCMTRDTGRRAVLVTKCDHLSVNDLIINNPNTRKVANEAALEFVDCVKGTVSNVKLIGQTSNGLAIKGDTGRHMQYRDIMYEGFTPATPVVLGTHLQTNVVNVG
Physico‐chemical
properties
protein length:772 AA
molecular weight: 83236,48290 Da
isoelectric point:6,28710
aromaticity:0,07513
hydropathy:-0,16749

Domains

Domains [InterPro]
DC_0369
STR
1–769
DC_0369
IPR005604
ATT
12–114
IPR005604 G3DSA:2.10.10.80 IPR011050 IPR006626 IPR006626
IPR040775
RBD
156–207
IPR040775 IPR012334 IPR006626 IPR012334
IPR006626
Unmapped
400–422
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR011050
GENB_d954a941dec1
1 772
Architecture
STR
ATT
STR
ATT
STR
STR 1-11 | ATT 12-114 | STR 115-144 | ATT 145-216 | STR 217-769 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_d954a941dec1
1 772
Domain Start End Length (AA) Confidence
N-terminal 1 309 309 0,9959
Central domain 310 761 453 0,9976
C-terminal 762 772 10 0,3387
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-309
Central
310-761
C-terminal
762-772

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EcpYZU01
[NCBI] 		2483604 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MK033136.1_CDS_[14184..16502] [NCBI]
Genbank nucleotide accession
MK033136.1 [NCBI]
CDS location
range 14184 -> 16502
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
56f6db5c675d3b87341164663546f2ecc2d17e416bfaa532e399aeafeb62e66c

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,8634
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50