Protein

View in Explore
Genbank accession
YP_009210005.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
Protein sequence
MEKFMAEFGQGYVQVPVLSENNAVRYKLSIAGTCTKSPNYPYVKFQDEAFGPQNFQNGLNLIEINPVTNTITATKNYGFTKDYDVISQAFVTYINSIPAGRIVCLISQGKLNASQTLIDWFRAHGSTAFPDKWLIDQVDTSYAAFYITGRNAIVKEHVLYNDGVTVEDVLTPLEMVYDDFADVGGTGFPLRIVEDENTYYSNVTQEIKRFPTDDPITPVATYNMAPGDTFYLKFQLTYDQALKDLGTTQMSVRFFTGQTMIQSNDYDIPATGQASPPAGAWMTFERYVVVPPNADGFTLYARKTVTTGQGGVRNIFFTEIARQETQAKSAEIGVNGIRMVVAGEPGNMGNVIAQLNDKNATRSSQAGFVFAAEFREKQ
Physico‐chemical
properties
protein length:378 AA
molecular weight: 41939,63680 Da
isoelectric point:4,85254
aromaticity:0,12169
hydropathy:-0,23942

Domains

Domains [InterPro]
DC_0912
STR
1–378
DC_0912
PS52031
LEC
22–192
PS52031
IPR039477
STR
57–129
IPR039477
YP_009210005.1
1 378
Architecture
STR
STR 1-378
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_VR25
[NCBI] 		1567028 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gaprivervirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009210005.1 [NCBI]
Genbank nucleotide accession
NC_028925 [NCBI]
CDS location
range 155024 -> 156160
strand +
CDS
ATGGAAAAATTTATGGCTGAATTTGGACAGGGATATGTCCAGGTTCCCGTGCTTTCTGAAAATAACGCAGTAAGATATAAATTGTCGATTGCAGGGACTTGTACTAAATCGCCAAACTATCCCTACGTTAAGTTTCAAGATGAGGCCTTCGGGCCTCAGAACTTCCAGAATGGATTAAACCTTATTGAAATCAACCCTGTAACAAATACAATTACAGCAACCAAAAACTATGGTTTCACAAAGGATTATGATGTAATTTCACAAGCTTTTGTGACTTACATTAATTCAATCCCGGCTGGTAGAATTGTTTGTTTGATATCACAGGGTAAATTAAATGCATCACAGACTTTAATTGATTGGTTTCGTGCTCATGGCTCGACTGCATTCCCAGATAAGTGGTTAATCGACCAGGTTGACACATCTTATGCAGCCTTTTATATCACCGGACGAAATGCAATCGTTAAAGAACATGTATTGTATAATGATGGGGTAACTGTTGAGGATGTATTGACTCCATTGGAAATGGTGTACGACGACTTTGCTGATGTTGGTGGCACAGGCTTCCCCCTGCGCATCGTGGAAGACGAAAATACATATTACAGTAATGTTACACAAGAAATAAAACGCTTCCCCACAGACGACCCTATCACTCCTGTGGCCACATATAATATGGCTCCTGGTGATACTTTTTATTTGAAGTTTCAACTGACTTATGACCAGGCGTTAAAAGACCTTGGGACAACTCAGATGTCTGTACGATTCTTTACTGGTCAGACAATGATTCAGTCAAATGATTATGATATCCCGGCGACTGGTCAGGCAAGTCCGCCCGCTGGAGCATGGATGACATTTGAACGCTATGTTGTTGTTCCACCGAATGCTGATGGATTTACATTATATGCAAGGAAGACTGTAACCACAGGTCAGGGTGGAGTAAGGAATATTTTCTTCACAGAAATAGCGAGACAAGAAACTCAAGCCAAATCTGCTGAAATTGGTGTCAACGGTATAAGAATGGTTGTTGCCGGAGAACCAGGTAATATGGGTAATGTCATTGCACAATTGAATGATAAAAATGCAACAAGGTCCAGTCAAGCTGGATTCGTATTTGCGGCTGAATTCAGAGAAAAACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f27f112a9ef514a484c973e0fe85a9b11d80ed2193b487a6eb667657408bc1e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
VR bacteriophages - a small but diverse group of low-temperature viruses Kaliniene,L., Meskys,R., Simoliunas,E., Zajanckauskaite,A. and Truncaite,L. 2015-03-10 — GenBank