Protein

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Genbank accession
QJF12290.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSIQYASISSLLASPFQRLTSAMWNTAVLTLSEIYFGGSLIDRQLFQNGNLYVPNNITAQVGNFSEAVYVAGQPVITEEDPIYIAGFVGSAIQQIQAILNSQLQLYEAIVQMPYDVYSAISKLTAGTVTQTQSALQQEIANVYQTLYQVVIGVDNQLKTVISPVLYLPQLIQNVYENIYLVSAKLTNQIVIGLSNAIYSVADALLYALAYVYLAMNSLTNAINKLTLYMSPPAIQGLQLSISTTPQPIYAGPAIETVKIILQNLSNYIVYIGNQLYNNFPILPGDILEFSVNNPSNVYAWATGPCTVYALFETL
Physico‐chemical
properties
protein length:314 AA
molecular weight: 34431,11600 Da
isoelectric point:4,20764
aromaticity:0,10828
hydropathy:0,37834

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Saccharolobus solfataricus rod-shaped virus 1
[NCBI] 		2730619 Viruses > Adnaviria > Zilligvirae > Taleaviricota > Tokiviricetes
Host Sulfolobus solfataricus
[NCBI] 		2287 cellular organisms > Archaea > Thermoproteati > Thermoproteota > Thermoprotei > Sulfolobales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJF12290.1 [NCBI]
Genbank nucleotide accession
MN876841.1 [NCBI]
CDS location
range 6795 -> 7739
strand -
CDS
ATGAGCATTCAATATGCCTCCATCAGTAGCCTTTTAGCAAGTCCATTCCAGCGCTTAACATCCGCTATGTGGAATACCGCAGTCCTAACATTATCGGAAATTTATTTTGGCGGATCATTGATCGATAGACAATTATTTCAAAATGGCAATCTTTACGTTCCAAACAATATTACTGCGCAAGTTGGGAATTTTTCAGAAGCAGTGTATGTCGCAGGACAACCCGTTATAACGGAGGAGGACCCCATCTATATCGCAGGATTTGTAGGTTCTGCAATACAACAAATTCAAGCAATTTTGAACAGTCAATTGCAATTATATGAAGCAATTGTACAAATGCCTTATGACGTTTATAGCGCAATATCCAAATTAACTGCGGGGACAGTTACACAGACACAGAGCGCATTACAACAAGAAATTGCAAATGTTTATCAAACCCTATATCAAGTTGTAATTGGAGTTGATAATCAATTAAAAACTGTAATTTCTCCAGTCTTATATTTACCACAATTAATACAAAATGTTTACGAAAATATCTATTTGGTTAGCGCAAAATTAACAAATCAGATAGTTATAGGATTATCAAATGCAATTTATTCAGTTGCTGACGCCCTGCTTTATGCACTTGCTTACGTTTATTTAGCCATGAACTCCTTAACAAACGCAATAAACAAATTAACGCTTTACATGTCTCCGCCCGCAATCCAGGGTTTGCAACTGTCAATTTCAACAACTCCACAGCCAATTTATGCTGGTCCAGCGATAGAAACTGTAAAAATTATATTACAAAACTTATCAAATTATATTGTTTACATTGGAAATCAACTATATAACAATTTCCCAATTTTACCAGGGGATATTTTAGAATTTTCAGTCAACAATCCATCAAATGTCTATGCCTGGGCAACTGGACCCTGCACTGTTTATGCATTATTCGAAACCCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e6456a52af7521102d68bb982c0be7bbb55dbfc2ab2861fc2b77d93b2906e6ef
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5681
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New virus isolates from Italian hydrothermal environments underscore the biogeographic pattern in archaeal virus communities Baquero,D.P., Contursi,P., Piochi,M., Bartolucci,S., Liu,Y., Cvirkaite-Krupovic,V., Prangishvili,D. and Krupovic,M. 2020 32322010 GenBank