Protein

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Genbank accession
AEZ65670.1 [GenBank]
Protein name
virion structural protein and packaging
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MADLRSRFIEDYAGGLLNVSRQELTSTGEVLSQDGLLSNASIFIEDGTGTKSGLKLGVAVVEAVDPTTEEGVVNVRYADRTYASIRDLKIFSTAVASAQAALSDAATSSISNLENAFLLLEESQRTSEAGVETRLSIFEDSLDQVRTIVGSNTGGQTLDARVDSLEASLNQDTSNLGALRDIINNFGLFSKAQFGPDGPVETIKFKVETSEEEKADGTYAVNGLTASTSGGSGLNVTVTVSDGVVSSVVVNNGGNNFKLGDKVIIAGSSTGTGGNIILEVRKLATTHANYGSTTDAKITTLGNEIQKLIVKLNDVVDILNPE
Physico‐chemical
properties
protein length:322 AA
molecular weight: 33705,92490 Da
isoelectric point:4,47678
aromaticity:0,04658
hydropathy:-0,07733

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM5
[NCBI] 		1137745 Uroviricota > Caudoviricetes > Aurunvirus >
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEZ65670.1 [NCBI]
Genbank nucleotide accession
JQ245707 [NCBI]
CDS location
range 51043 -> 52011
strand -
CDS
ATGGCAGACCTTAGATCTAGATTTATTGAAGACTACGCTGGAGGTCTATTAAACGTCTCCAGACAAGAACTTACAAGCACAGGAGAAGTTCTTTCTCAAGACGGACTATTATCTAATGCAAGCATTTTTATAGAAGATGGTACAGGGACAAAAAGTGGATTAAAGCTAGGCGTTGCCGTTGTAGAAGCGGTAGATCCTACAACTGAAGAAGGAGTTGTAAACGTAAGATACGCAGACAGAACTTACGCAAGTATAAGAGACCTGAAGATTTTTTCTACAGCCGTTGCATCAGCACAAGCAGCTTTGTCAGATGCTGCTACGTCTTCTATTTCTAACTTAGAGAACGCATTTTTGTTATTAGAAGAATCTCAAAGAACGAGCGAAGCCGGAGTAGAAACTAGACTTAGTATCTTTGAAGATAGCCTTGATCAGGTAAGAACAATTGTAGGCTCAAATACAGGCGGACAAACTTTAGACGCAAGAGTAGATTCTTTAGAAGCTTCTTTAAATCAAGATACTTCTAATCTTGGAGCTCTAAGAGATATTATTAATAATTTTGGTCTTTTTAGTAAAGCACAGTTTGGCCCAGATGGCCCAGTTGAAACAATAAAATTTAAAGTTGAAACATCAGAAGAAGAAAAAGCAGACGGAACTTACGCAGTAAATGGGCTAACTGCAAGTACCTCTGGAGGCAGCGGTTTAAACGTAACGGTAACTGTTTCAGATGGTGTAGTTAGTTCGGTAGTTGTAAATAACGGCGGAAACAATTTTAAACTAGGAGATAAGGTAATTATTGCCGGATCTAGTACCGGCACTGGCGGAAATATTATATTAGAGGTAAGAAAATTAGCTACTACACATGCCAATTACGGATCAACCACTGACGCCAAAATTACAACGCTAGGAAACGAAATTCAAAAACTTATTGTTAAATTGAACGACGTTGTTGATATTCTAAATCCTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
792ab9580881648f744931cdd226a4dabc3bbda4d27792219ea4298ff2fe3d9c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5608
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel lineage of myoviruses infecting cyanobacteria is widespread in the oceans Sabehi,G., Shaulov,L., Silver,D.H., Yanai,I., Harel,A. and Lindell,D. 2012 22308387 GenBank