Protein

View in Explore
Genbank accession
UXE02938.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MALNFTPITENSTIADLTKQVNNIGGVLTEDRNVFEVTTDLQADVSRTQKVKLTTDRGLAKDIDYTNYLRDIRKVGLYYIGARTLATMYDKPDMENMDVLLQVLTLDTEDRVVQILHTLSTADSKVKVLYRFVNNYQTSQWQVVQSLPNNKYTSQIGGSPFDINTQGIYYVSSMSDMPNGVYEGFLQVIIDNNENRMLRLTDISTGKEYLNVKKSYGSWGTWKTDLDVQKISKYLLSNVDGDAESNNYSLSVYTTDNITFQQAIAKHIEETSKTVFTFYIQGGVVGSPSSVSCRGVFISDSTNFTNLYGVYTAIGTDGRTINGSVNGNVWNTTKTLPGFKELWNGAHNFKDTNKKETMSDSISNYQYVEVYTRYRALQNTKGTDKTGTLCHKFYIDGDGIYTCSGAYVSGDSNIGVEYYRVTLSISGDTWTIKDSAVNNNKDQYVTRVVGISLP
Physico‐chemical
properties
protein length:454 AA
molecular weight: 50854,14950 Da
isoelectric point:5,41541
aromaticity:0,10573
hydropathy:-0,41079

Domains

Domains [InterPro]
DC_1773
STR
10–255
DC_1773 IPR057110
DC_0448
STR
194–453
DC_0448
UXE02938.1
1 454
Architecture
STR
STR 10-454
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UXE02938.1
1 454
Domain Start End Length (AA) Confidence
N-terminal 1 322 322 0,7206
Central domain 323 443 122 0,0171
C-terminal 444 454 10 0,9947
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-322
Central
323-443
C-terminal
444-454

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Koomba-kaat_1
[NCBI] 		2980087 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UXE02938.1 [NCBI]
Genbank nucleotide accession
OP263969.1 [NCBI]
CDS location
range 94228 -> 95592
strand -
CDS
ATGGCACTAAATTTTACACCTATTACAGAAAATAGTACAATAGCAGATTTAACAAAACAAGTTAATAATATAGGTGGTGTACTAACTGAGGACAGAAATGTCTTTGAAGTAACAACAGACTTACAAGCAGATGTAAGTAGAACACAAAAAGTTAAGTTAACAACAGATAGAGGGTTAGCTAAAGATATTGATTATACTAATTACTTAAGAGATATTAGAAAGGTAGGTCTATATTATATAGGAGCTCGTACATTAGCTACTATGTATGATAAACCTGATATGGAAAACATGGATGTACTACTTCAAGTACTAACCTTAGATACTGAGGATAGAGTAGTACAGATATTACATACATTATCTACCGCTGATTCTAAAGTAAAAGTACTATATAGGTTTGTTAACAATTATCAAACATCACAATGGCAAGTAGTACAAAGTCTACCAAATAATAAATACACATCTCAAATAGGTGGAAGTCCTTTTGATATTAACACACAAGGTATATATTATGTGTCTAGTATGTCGGATATGCCAAATGGTGTATATGAAGGGTTTTTACAGGTTATTATAGACAATAATGAAAATAGAATGTTAAGATTAACGGATATTAGCACAGGAAAAGAATATCTTAATGTTAAAAAATCGTATGGTAGCTGGGGCACATGGAAAACTGATTTAGATGTACAAAAAATAAGTAAGTATTTGTTATCTAATGTAGATGGTGATGCTGAAAGTAATAACTACTCTTTATCTGTATATACTACAGACAACATAACATTTCAACAGGCAATAGCTAAACATATTGAAGAAACAAGTAAAACTGTTTTTACTTTTTATATACAAGGAGGTGTTGTAGGGTCTCCGTCCTCGGTTAGTTGTAGAGGTGTATTCATATCAGATTCAACTAACTTTACTAATCTATATGGTGTTTATACTGCTATAGGTACTGATGGAAGAACTATTAATGGTTCTGTAAATGGTAATGTGTGGAACACAACAAAAACACTACCAGGATTTAAAGAGCTGTGGAATGGTGCACATAACTTTAAAGATACAAATAAAAAAGAAACCATGTCTGATTCTATATCTAACTACCAGTATGTAGAAGTATACACAAGATATAGAGCTCTACAAAATACAAAAGGTACTGATAAAACAGGTACACTATGTCATAAGTTCTATATAGACGGAGACGGTATTTACACATGTTCAGGAGCTTATGTATCAGGAGACTCTAATATTGGAGTAGAGTATTATAGAGTAACACTATCTATTAGTGGTGATACTTGGACAATTAAAGATAGTGCAGTAAATAATAATAAAGACCAATATGTTACACGTGTTGTAGGTATCTCTTTACCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3fcd91d9b1d29ac954b1dbef29fea39a750d478595962377aaaeca4585b13e7c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7995
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of 2 Lytic Staphylococcus aureus Bacteriophages Isolated from Wastewater Iszatt,J.J., Larcombe,A.N., Garratt,L.W., Kicic,A., Agudelo-Romero,P. and Stick,S.M. 2022-12-15 — GenBank