Protein

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Genbank accession
WJJ58413.1 [GenBank]
Protein name
tail spike protein with pectin lyase domain
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLQSVKIPELPSADTLTEDDLIVVDQPDDTKKATLFQVLNHLEDVVEQSTLVALAQPTGAGGIGVKKSGTVQDWIDGQLRSLFYYLSPAKIATVIAGTATDITAEIQAAMNDSITIWLPAGSYYVTESITAAANSGLVGPGSKLASIDNRSSSHLFIIGAGGYIRGWKPWRDFSVTASGNNTADAYAFYYSDRQDASGAPVYTIAQHFSGIEINAWGKLGGGWYLQECFRVVIRDCGATGLSQCFRLVGSVVQTTIDNFVHNGDGAGVITGRTYTYGLTTETKTYGNGTTFTPEGLTVVNTRFVKQDIGVKITGGLYLMFCNVEADYSRYNGFWYNGGGQATFDNCYVGVQGNRDGNFVGFLLPATATNIAEAVNVRGCTVNMATNTNADAASFTSYGVQIGNSSVASKSALVDGCTFRGAGYTDGIYVYRGDCVTLIANRFQFSGSNIRVDECSSLTMMNNAGNGSGTYSLTTVNQNAKWVIFNNTETFSVLSHINPRNFLAMNSNYTTKNIRRVERGSSYANVSVPAGGSYSHTIAVSTSLLSTVVAGGAIPSGLIFSAAVASPTTVRVTFFNPTTSPITLNTTIYVDVTFDPVS
Physico‐chemical
properties
protein length:597 AA
molecular weight: 63567,27920 Da
isoelectric point:5,34550
aromaticity:0,10385
hydropathy:0,01122

Domains

Domains [InterPro]
DC_1918
ATT
1–238
DC_1918 IPR006626 DC_0884
IPR011050
STR
88–351
IPR011050 IPR006626 IPR006626
IPR012334
STR
96–314
IPR012334 IPR006626
IPR006626
Unmapped
228–249
IPR006626 IPR006626
WJJ58413.1
1 597
Architecture
ATT
STR
ATT 1-238 | STR 239-593 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJJ58413.1
1 597
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,9863
Central domain 102 503 403 0,9874
C-terminal 504 597 93 0,9765
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-503
C-terminal
504-597

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_NDO71
[NCBI] 		3041490 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ58413.1 [NCBI]
Genbank nucleotide accession
OP558001.1 [NCBI]
CDS location
range 32132 -> 33925
strand -
CDS
ATGCTACAGAGTGTTAAAATTCCAGAGTTGCCAAGTGCGGACACTCTAACAGAAGATGACCTGATCGTGGTTGACCAACCAGATGATACAAAGAAGGCCACTTTATTTCAAGTTTTAAATCATCTTGAAGATGTCGTTGAGCAGTCAACACTGGTGGCGTTGGCACAGCCGACAGGAGCAGGTGGCATTGGGGTAAAAAAATCAGGCACGGTGCAGGACTGGATTGACGGTCAGTTGCGCAGCCTTTTCTACTACTTATCTCCGGCAAAGATTGCGACCGTGATAGCTGGAACGGCCACAGATATAACCGCAGAAATCCAGGCAGCAATGAATGATAGTATTACTATCTGGCTTCCTGCTGGTTCATACTATGTAACTGAGTCCATTACGGCTGCCGCTAACTCCGGGCTTGTCGGCCCTGGTTCTAAGTTAGCTTCCATCGACAATCGTAGTTCCAGCCATCTTTTTATTATTGGAGCAGGTGGCTATATCAGAGGTTGGAAGCCTTGGAGAGACTTCTCAGTAACTGCTTCTGGGAACAATACCGCGGATGCTTATGCATTCTATTACTCCGACAGACAAGATGCCAGCGGCGCGCCTGTCTATACGATCGCGCAGCACTTTTCAGGGATAGAGATCAATGCATGGGGTAAGCTAGGCGGCGGGTGGTATCTTCAGGAGTGTTTCCGCGTTGTTATTCGTGATTGCGGGGCTACTGGGCTATCACAATGTTTTAGGCTGGTTGGTAGCGTAGTACAAACCACGATAGATAATTTTGTCCATAACGGTGACGGTGCGGGAGTCATCACCGGGCGGACATATACGTATGGGCTGACAACTGAAACCAAAACATACGGAAACGGAACCACGTTTACCCCTGAAGGGCTTACTGTCGTAAACACTCGATTCGTCAAGCAGGATATAGGCGTCAAAATAACTGGCGGCCTTTATCTGATGTTCTGCAATGTCGAGGCAGATTACAGCCGATATAATGGGTTTTGGTATAACGGCGGGGGGCAAGCAACATTTGATAATTGCTATGTGGGTGTGCAAGGGAACCGCGACGGGAATTTCGTCGGTTTTCTATTACCGGCAACTGCGACAAACATCGCTGAAGCAGTGAATGTTCGCGGATGCACCGTAAACATGGCTACAAATACAAACGCTGACGCTGCCTCATTTACATCTTATGGCGTTCAAATAGGTAACAGTTCCGTTGCATCTAAATCTGCTCTTGTTGATGGCTGCACTTTCCGTGGGGCAGGCTATACGGACGGGATCTATGTCTACCGTGGGGATTGTGTTACATTAATAGCAAACAGATTCCAATTTTCAGGCTCGAACATACGAGTTGATGAATGTTCGTCACTCACAATGATGAACAATGCTGGAAATGGTAGTGGTACATATTCACTGACAACGGTTAACCAGAATGCCAAATGGGTAATTTTCAACAACACAGAGACGTTTTCAGTGCTGTCACACATTAACCCACGAAATTTTTTAGCGATGAACTCAAATTACACGACTAAAAACATTCGGCGTGTTGAGCGAGGTTCATCTTACGCCAATGTTTCAGTTCCTGCGGGGGGGTCTTACAGCCACACGATTGCAGTTAGCACATCTCTGCTTTCTACGGTTGTTGCTGGGGGTGCTATTCCATCCGGTCTTATTTTTAGTGCGGCAGTAGCAAGTCCTACTACAGTAAGGGTTACATTTTTTAATCCTACTACATCACCTATAACGCTAAATACGACAATCTATGTAGACGTTACATTTGACCCTGTATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f8211f8e9ca9e040d2233be9f03f90a1db4f6b0643680318822d64cce1efeb6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8111
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50