Protein

View in Explore
Genbank accession
AZB66806.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MANQDLFYDITKQGTEQEKQQHLISRVGDGGLKTVTVTVWSNGTPYNITGLTPVFEGVKPDGQRIIDTRGAIVLDPVNGVFRYTFPHQASTAEGEYKQAFFKLKRGEQTDSTLEIKINVLKNMVEFGINSESYYTEYQQKVSELEVKINEYLEQLKTKAAGTEAQVEANANLVKGLKQQLDLIQSIANERELMTRGEFNEAINTVNNTVDTISSNFNTFKRDSTEELNRFKGEVTGVKTGVLDDVANITKSGVYYFDATTKNVPTRNTNNSNGYIQAVMKDENNGMITMLGAGYSIEKYRGQLHGRWVSSVPVKLWSGHLVKGQTATLTGNCHNFGNLLIEVSYTTNRHGTELVSIPSNGNLVYLNNYGMKSSGDGFKAGYLDEVVIRIKDDTHILLEKTLRAVGDEKATNSDAYITGIYGIY
Physico‐chemical
properties
protein length:423 AA
molecular weight: 47020,11510 Da
isoelectric point:5,77270
aromaticity:0,08747
hydropathy:-0,46407

Domains

Domains [InterPro]
DC_1249
STR
1–363
DC_1249
IPR018913
ATT
3–144
IPR018913
G3DSA:2.60.40.3350
ATT
7–125
G3DSA:2.60.40.3350 Coil
AZB66806.1
1 423
Architecture
ATT
STR
ATT 1-144 | STR 145-363 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiSP119-2
[NCBI] 		2491317 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZB66806.1 [NCBI]
Genbank nucleotide accession
MK075005 [NCBI]
CDS location
range 35203 -> 36474
strand +
CDS
ATGGCAAATCAAGATTTATTTTATGACATTACAAAGCAAGGTACGGAACAAGAAAAGCAGCAACATTTAATAAGTCGCGTTGGCGATGGTGGGCTTAAAACAGTTACTGTTACAGTTTGGTCTAATGGTACCCCTTATAATATCACGGGTTTGACACCAGTTTTTGAAGGCGTTAAACCGGATGGCCAAAGAATTATTGACACACGAGGGGCTATCGTATTAGATCCTGTCAATGGTGTATTTCGATACACATTCCCACATCAGGCAAGTACTGCTGAAGGCGAATATAAACAAGCGTTTTTCAAATTAAAACGTGGGGAACAGACTGATTCGACTCTAGAGATTAAAATTAACGTACTAAAAAATATGGTTGAATTCGGAATTAATTCAGAATCATACTATACTGAGTATCAACAAAAAGTCTCAGAGTTAGAAGTTAAAATTAATGAGTATTTAGAACAGTTGAAAACGAAAGCGGCCGGCACTGAAGCTCAAGTAGAAGCAAACGCAAATTTAGTCAAAGGATTAAAGCAGCAACTAGATTTAATTCAATCTATCGCCAACGAGCGCGAATTGATGACACGTGGTGAATTTAACGAAGCTATTAATACTGTAAATAATACAGTTGACACTATTAGTTCTAATTTTAATACTTTCAAAAGAGACTCAACAGAAGAGTTAAACCGCTTCAAAGGTGAAGTAACTGGTGTTAAAACTGGTGTGCTTGATGACGTGGCCAATATCACAAAATCAGGTGTTTACTATTTTGATGCTACGACAAAGAATGTACCGACTCGCAATACAAATAACTCTAATGGCTATATTCAAGCCGTTATGAAAGATGAAAATAATGGGATGATTACGATGCTTGGCGCAGGTTATTCTATTGAGAAATATCGAGGTCAGTTGCATGGTCGTTGGGTATCTTCAGTTCCTGTAAAATTATGGAGCGGTCATCTCGTCAAAGGCCAAACAGCAACTTTAACAGGAAACTGTCATAACTTTGGCAACCTTTTAATTGAAGTAAGCTATACTACAAATCGACATGGTACAGAATTAGTAAGCATCCCTTCGAATGGTAACCTGGTTTACTTAAATAATTATGGAATGAAAAGTTCTGGCGATGGTTTTAAGGCTGGTTATTTAGATGAAGTCGTAATTCGAATTAAAGATGACACACATATTTTGCTAGAAAAAACTTTAAGAGCTGTCGGTGATGAAAAAGCAACTAATTCTGATGCTTATATTACTGGTATTTACGGCATTTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1110af9ea264ab8260b6d0d89334703951b64300c0c2d91693b7f4f91e6fb08b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7825
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage of Staphylococcus pseudintermedius Wipf,J.R.K., Deutsch,D.R. and Fischetti,V.A. 2014-10 — GenBank