Protein

View in Explore
Genbank accession
BHD21360.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MIKIDIENTILPPVFQMILPAVAFGDDKWITIDLTSGEWEPSNPANKPDSFGYKQVAGSFFRFSITATTKSDFEGVAVGPRLFINGLIDENSGLEFDMLQMEEGDSPTSIIPTDGSPATRAVETIRVDGPVFQNPRGTILSETLASSGSVGAGLQHGYSVVVGERDNTSNFIGLALRETAPGKNPETKVVAKASGGVDYGVTVSHIENTIERVGVSMFPGNALIVSVNGSDAVGGTVPIPNEIYTANSISFGALPSGNSSSSWSGYIRLFRVYDIPFEDANLKTLTGG
Physico‐chemical
properties
protein length:288 AA
molecular weight: 30486,76360 Da
isoelectric point:4,51366
aromaticity:0,08333
hydropathy:-0,04340

Domains

Domains [InterPro]
DC_1416
STR
18–288
DC_1416
NF048003
Unmapped
25–121
NF048003
BHD21360.1
1 288
Architecture
STR
STR 18-288
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BHD21360.1
1 288
Domain Start End Length (AA) Confidence
N-terminal 1 106 106 0,4480
Central domain 107 277 172 0,0695
C-terminal 278 288 10 0,9951
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-106
Central
107-277
C-terminal
278-288

Taxonomy

  Name Taxonomy ID Lineage
Phage Alcaligenes phage SRA-1
[NCBI] 		3459510 Viruses >
Host Alcaligenes faecalis
[NCBI] 		511 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BHD21360.1 [NCBI]
Genbank nucleotide accession
LC889977.1 [NCBI]
CDS location
range 74816 -> 75682
strand +
CDS
ATGATTAAGATTGATATAGAGAATACGATTCTACCGCCAGTATTTCAGATGATCCTACCGGCTGTAGCATTTGGGGATGACAAGTGGATAACTATTGACTTGACAAGTGGTGAGTGGGAGCCAAGTAACCCAGCAAATAAGCCAGATAGTTTTGGCTATAAGCAGGTAGCGGGGAGCTTCTTCAGATTCTCAATAACAGCTACCACTAAATCAGATTTTGAGGGAGTGGCAGTAGGGCCAAGATTGTTTATAAATGGCTTGATTGACGAAAATTCAGGATTGGAGTTTGATATGCTCCAGATGGAAGAAGGTGATAGCCCAACATCCATTATCCCTACAGATGGATCACCAGCCACAAGAGCTGTTGAAACAATTCGTGTAGATGGCCCAGTGTTCCAAAACCCTAGAGGAACTATTCTTTCTGAAACTCTAGCATCTTCTGGTTCGGTTGGAGCAGGATTGCAGCATGGTTATAGCGTAGTTGTTGGGGAAAGAGATAACACCTCTAATTTCATCGGTCTTGCTCTTCGAGAAACAGCACCCGGAAAAAATCCAGAGACAAAGGTTGTTGCTAAGGCATCAGGTGGTGTAGATTACGGAGTCACAGTTTCACACATTGAAAACACTATTGAACGTGTCGGGGTGTCGATGTTTCCGGGGAATGCCTTGATTGTTTCTGTTAATGGAAGCGACGCAGTGGGGGGAACGGTTCCTATTCCTAATGAAATTTACACGGCTAATTCTATCAGCTTCGGTGCATTGCCGTCTGGTAATAGCAGTAGTTCATGGAGTGGGTATATTCGGCTCTTCAGAGTATATGATATCCCATTTGAAGATGCAAATTTGAAGACTTTAACAGGTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0486ad73520a5826fda52783376370bd38314f358ba04368d05febedc3a9751f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent bacteriophage of Alcaligenes faecalis Atyabi,S.R., Bouzari,M. and Soleimani-Delfan,A. 2014-10-09 — GenBank