Protein

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Genbank accession
XZO20949.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MARFKNPETIHVADGVETVFSLDFPFLRREDVFVQVDKILTTDYTWVDNTNIQLAEVPKQGQEVRIFRDTPAQVPDTQFSQGIPFLPRHIDANNKQLLYAVQEGINTANLALDGVLDAIRIAEEARRLAQEALDAANEALRRALGFAEIRTVTEDSDIDPSWRGYWNRCITADKPLTLTMQMEDPDAPWIEFSEVHFEQAGVRDLNIVAGPGVTINRLQNTTMQLYGENGVCTLKRLGPNHWIVFGAMEDE
Physico‐chemical
properties
protein length:251 AA
molecular weight: 28370,60050 Da
isoelectric point:4,63615
aromaticity:0,08367
hydropathy:-0,31394

Domains

Domains [InterPro]
DC_0220
STR
11–251
DC_0220
IPR005604
ATT
12–117
IPR005604 Coil
XZO20949.1
1 251
Architecture
ATT
STR
ATT 11-117 | STR 118-251
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 20176-1
[NCBI] 		3373948 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZO20949.1 [NCBI]
Genbank nucleotide accession
PQ510338.1 [NCBI]
CDS location
range 36538 -> 37293
strand +
CDS
GTGGCTCGGTTCAAGAACCCCGAGACCATCCACGTTGCAGATGGGGTCGAGACTGTATTCAGTCTCGACTTCCCATTCCTGCGTCGTGAGGACGTATTCGTCCAGGTCGACAAGATACTCACCACCGACTATACGTGGGTGGACAACACCAACATTCAGCTTGCGGAAGTGCCTAAGCAGGGCCAAGAGGTCCGCATCTTCCGCGACACCCCCGCCCAAGTGCCGGATACGCAGTTCAGCCAGGGCATCCCGTTCCTGCCTCGGCACATCGACGCGAACAACAAGCAGTTGCTGTACGCTGTGCAGGAGGGCATCAACACCGCAAACCTCGCCCTAGACGGAGTTCTCGACGCGATCCGTATCGCCGAGGAAGCCCGTCGCCTCGCACAGGAAGCACTCGACGCCGCTAACGAAGCGCTGCGCCGCGCCCTGGGCTTCGCCGAGATTCGCACCGTTACGGAAGACTCGGACATCGACCCGAGCTGGCGTGGTTACTGGAACCGCTGCATCACCGCTGATAAGCCGCTGACCCTGACCATGCAGATGGAAGACCCGGATGCACCCTGGATCGAGTTCAGCGAGGTTCACTTCGAACAGGCGGGTGTGCGCGACCTCAACATCGTGGCCGGCCCCGGCGTGACCATCAACCGGTTGCAGAACACCACCATGCAGCTCTACGGCGAGAATGGAGTGTGTACCCTCAAGCGTCTCGGGCCTAACCACTGGATCGTGTTCGGAGCCATGGAGGACGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9786946bf957ca5a7a45a43c753ff1830821f366b0c10b6ee5583b29d28c5098
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9148
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage training: Pseudomonas aeruginosa Burke,K.A., A Filippov,A.A., Nikolich,M.P. and Peters,T.L. 2023-12-18 — GenBank