Protein

View in Explore
Genbank accession
QDH84293.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MPWKTMTLRGEKGSPLTNAEMDANLQSVLDYMNGVMLPQTEHDLDNYDVPGVYGQNATAGAVAGLNYPIDPQTGTPVAGVLRVWKGYPNDSTNISCHQEYRSYFKENSTIFYRNRPNPTTGFGAWIRIPKFNETWTTSGLTAATDANTLATGNMLYTWTNGAVVSGGSNWPAVPTGYIGRGHLEVVAYNATMIFQRLTLPQATSLHPYVFERYGVVGGSWAAWRIAGPISSKAMLPGADYGDVYVDGAGWYKWTSSGYILASTSVLLPATAHNLNDYVEPGEWYQGTVAIATPANNYPVAITGFLSIKQFGSATLQTYVTRETTPRTFTRTKNGATAWSNWIESVSRTDAMTRIALSAGTDANTLVEENTYYTWANGTPVTGSGAANWPPVANASVGAGFMETFYVGSGLIVQRCTLLINAAKPRVFERFGAGSGWEPWKIISSITNASYLPVGDCGDVYVDFKGWYTWGGSSYTARTFSEGALFGNWNQYSTYFQSFSGNTSALAVPGAGGTFSSVGAASHSGPNGQQIFMYLNRGDDIGLISAASYGSGFSQPHLAFATNNNYRHVITNDGRHVFGNWYNPGYITAVGYIHFQGGGQQHGLAFRPAVNDTAAINFFNAAGASVGSITTTTTAVFYNTNSDYRLKKDIEDMEPEEGLRSILEARPRWFTMKEDNSRQRGFIAHELQAVIPEAVTGKKDEVWPLEAGVGPRMKFQSVDMSKVVPHLVAAVQALNSKLEDALNRIAVLEGRKQEEEE
Physico‐chemical
properties
protein length:756 AA
molecular weight: 82217,65720 Da
isoelectric point:5,86791
aromaticity:0,12169
hydropathy:-0,26270

Domains

Domains [InterPro]
DC_1584
STR
22–217
DC_1584 DC_1584 DC_1584 IPR030392 Coil
cd19958
STR
43–128
cd19958 cd19958 cd19958 cd19958 DC_0203
IPR030392
CHP
641–744
IPR030392
QDH84293.1
1 756
Architecture
STR
RBD
STR 22-640 | RBD 641-755 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH84293.1
1 756
Domain Start End Length (AA) Confidence
N-terminal 1 414 414 0,2546
Central domain 415 613 200 0,1900
C-terminal 614 756 142 0,9967
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-414
Central
415-613
C-terminal
614-756

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AxyS_19-32_Axy16
[NCBI] 		2591051 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH84293.1 [NCBI]
Genbank nucleotide accession
MK962634.1 [NCBI]
CDS location
range 17533 -> 19803
strand +
CDS
ATGCCATGGAAGACTATGACCCTTCGCGGTGAGAAGGGTTCGCCCCTTACCAACGCGGAGATGGACGCCAACTTGCAGTCGGTTCTCGACTACATGAACGGTGTCATGTTGCCTCAAACTGAGCATGACCTGGATAACTACGACGTTCCGGGGGTGTACGGACAAAATGCAACGGCCGGCGCGGTCGCGGGCCTCAATTACCCTATCGATCCGCAAACTGGAACGCCTGTCGCGGGCGTTTTGCGCGTGTGGAAGGGCTACCCCAACGATTCTACGAATATCTCCTGCCACCAGGAGTACCGGTCGTACTTCAAAGAAAACTCCACGATCTTCTACCGCAACCGCCCGAACCCCACCACCGGCTTTGGCGCGTGGATCCGCATACCCAAGTTCAATGAAACGTGGACGACCTCGGGCCTGACGGCTGCAACGGACGCAAACACCCTGGCTACGGGCAACATGCTGTACACCTGGACCAATGGTGCCGTAGTAAGCGGCGGTTCCAACTGGCCAGCCGTACCAACTGGGTATATCGGGCGTGGGCATCTGGAAGTCGTGGCCTATAACGCCACCATGATTTTCCAGCGCCTGACGCTGCCGCAAGCTACCTCTCTGCATCCGTACGTATTCGAGCGCTACGGTGTGGTAGGCGGCAGCTGGGCAGCGTGGCGTATCGCCGGGCCGATTTCTTCCAAGGCTATGCTGCCCGGTGCAGACTACGGTGACGTGTACGTCGACGGGGCGGGCTGGTACAAGTGGACGTCCAGCGGGTACATTCTCGCCAGTACGTCTGTCTTGCTGCCGGCTACTGCCCACAACCTCAACGACTACGTTGAGCCAGGCGAATGGTACCAAGGCACCGTAGCTATTGCTACCCCGGCCAATAACTACCCGGTGGCTATTACGGGCTTCTTGAGCATCAAGCAGTTTGGCAGCGCCACCTTGCAAACTTACGTTACGCGAGAGACTACTCCTCGTACGTTCACCCGCACTAAGAATGGCGCTACGGCTTGGTCCAACTGGATTGAGTCTGTGTCTCGTACGGACGCTATGACCCGTATTGCATTGTCTGCGGGCACTGACGCGAACACTCTGGTTGAAGAAAACACGTATTACACGTGGGCCAATGGAACTCCTGTGACCGGCAGCGGAGCGGCCAACTGGCCGCCTGTTGCCAATGCCAGTGTGGGTGCCGGCTTCATGGAAACGTTCTACGTCGGTAGCGGCCTAATCGTGCAGCGGTGCACTCTGCTAATAAACGCCGCCAAGCCGCGCGTTTTTGAGCGCTTTGGTGCTGGCAGCGGATGGGAGCCATGGAAAATCATTTCCTCCATTACCAACGCTTCGTACCTTCCGGTTGGGGACTGCGGTGATGTGTATGTGGACTTCAAGGGCTGGTATACTTGGGGTGGCAGCTCGTATACTGCACGTACCTTCTCTGAAGGGGCGCTGTTCGGCAACTGGAACCAATACAGTACGTACTTCCAAAGCTTCTCTGGGAATACGTCTGCGCTTGCGGTCCCCGGCGCAGGCGGCACGTTCTCGTCTGTAGGCGCGGCCAGCCATTCTGGGCCTAATGGTCAGCAAATCTTCATGTACTTGAACCGTGGAGATGATATTGGCTTGATTAGCGCTGCCTCCTACGGTTCGGGCTTCAGTCAGCCACACTTGGCGTTTGCCACGAACAATAACTACCGGCACGTTATTACCAATGACGGCCGGCATGTGTTTGGAAACTGGTATAACCCGGGGTATATCACTGCAGTTGGGTATATTCATTTCCAAGGTGGCGGACAGCAGCACGGTCTGGCTTTCCGTCCAGCGGTTAACGACACAGCGGCCATAAACTTTTTCAACGCAGCAGGCGCAAGTGTCGGGTCTATTACCACTACTACCACGGCTGTCTTCTACAACACGAACTCGGACTATCGCCTCAAAAAAGATATAGAGGATATGGAGCCGGAAGAAGGCCTGCGCTCCATACTCGAAGCGCGTCCCCGGTGGTTCACTATGAAGGAAGACAACAGCAGGCAGCGGGGTTTTATTGCTCACGAACTGCAAGCTGTTATTCCTGAGGCAGTGACGGGTAAGAAAGACGAGGTTTGGCCGCTGGAAGCGGGGGTAGGCCCTCGCATGAAGTTCCAAAGTGTGGACATGAGCAAGGTTGTTCCGCACCTTGTGGCCGCCGTACAGGCCCTCAACTCGAAGCTGGAAGACGCCCTTAACCGGATTGCAGTGCTGGAAGGAAGGAAACAAGAGGAAGAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc9473e3abe6710273d9fa99e093ad8063c9b3ae77d2c2546a4ad27b8e348c45
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of sixteen phages from Abidjan, cote d'Ivoire, isolated on a single strain of Achromobacter xylosoxidans Essoh,C., Vernadet,J.-P., Vergnaud,G. and Pourcel,C. 2020-01-02 — GenBank