Protein

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Genbank accession
YP_013537823.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,56
Protein sequence
MSSNTDILALVSTEADLAVDQIIEDSRRLHLIVNGTATEQAVTEDGSLIPSVRKAIIDNFYFKTPPLPWRNGSSVIEFNQLYAFTDVNGNVTWWYAPGATSSTPVVMRDSPINDGKFRPFFDKGNIQETYAPILSPVFRGNPTVPLAAEGDSSFTIANTAWVSREIEKVRGEVLEESRGEFQNIIVADDASLKDLYVSGETIFTGDRIAALDAELSLKRLRMTGTGAEIAFEQNGVPPQAGLTKRTNIKPFQVTTGVVDTDNITAREIKVGNTSVSTNSLDVDGFMQGDYLHLQGNANNAEDRPQLIVDGVAEINTLRVTNTIEGLKADVEGLDINPNSIVVERTAEIKGNTTLGADLSVSGNTVLKDVRIDGTLTGAGIGVDGKDISPRNVSATSVTVAENLNITGPTNASGDVTVNNLTVNGTLRADIDFGTSAVEFQDLTVTNRATIKDLEITGNVTGFTPSVDGEAISPSSVTTTGNIDVGNNLRVRGDLSLDGELSLPSLDTGDISAAEIDAASLSVSGDITAGTTSTTTVNNLVVTGTTTGITVTGNVDGQDILPSSVETTSVEASESVTTANLTATGETQVNNLTITGTVTGFEVDLTGRDIQVNTLTVTRGSTFDEVTANNITNNQKITTVDLQVTGNLTNANGEQFFANVTGQDILPNSVQSATSVRTKTLRVEETSLLEGAVTLNDGLTITAGNITSVQGQASFNDVQVFGSLLDANGNALGTAESINGKDISPRSVTAQVEIQTTAIVATGQAEVGSLISTGQVTAGSLEVSGIGNIDQVITDDIRAGKVTSGNTVITRTVGSNDPALEVRGPGEIQGDLNVTGTVTGNIDLSSQDVNVASMTSTGTVNALSIESRTSVTGLSGTFGEDYEGAPTYGITSLSGANINKNLRVGGNLTVVGNISGNIDLSGKAIEPASLSTTTATLTTANITDLTVTGQFNIPTVPLNVQSLSSENAISASKFSTTPKEVSTTSSSYIPDGSTSIYNVNVINDVEVKAPIGLLSSGKGESVFLFFEQDGTGGHAVTFGSEFVVHGTETINTDANTVSVVNMVYRGKGPLIDVFITRR
Physico‐chemical
properties
protein length:1077 AA
molecular weight: 112294,62130 Da
isoelectric point:4,28949
aromaticity:0,04364
hydropathy:-0,08059

Domains

Domains [InterPro]
IPR058969
ATT
13–118
IPR058969 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_0092
DC_0092
STR
105–400
DC_0092 IPR058970
DC_0092
STR
382–587
DC_0092
YP_013537823.1
1 1077
Architecture
ATT
STR
STR
ATT 13-118 | STR 119-587 | STR 671-1077
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_013537823.1
1 1077
Domain Start End Length (AA) Confidence
N-terminal 1 876 876 0,9887
Central domain 877 1066 191 0,0934
C-terminal 1067 1077 10 0,9850
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-876
Central
877-1066
C-terminal
1067-1077

Taxonomy

  Name Taxonomy ID Lineage
Phage Septuagintavirus sv54
[NCBI] 		3432369 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_013537823.1 [NCBI]
Genbank nucleotide accession
NC_130866.1 [NCBI]
CDS location
range 29649 -> 32882
strand +
CDS
GTGTCGTCTAATACTGATATATTGGCACTGGTAAGCACTGAAGCAGACCTCGCTGTTGATCAGATCATCGAAGACTCTCGAAGACTTCATTTGATCGTCAACGGAACTGCAACAGAACAAGCTGTTACAGAAGATGGTAGCTTAATTCCTAGTGTACGTAAAGCGATAATTGATAACTTTTATTTTAAAACTCCACCGTTACCGTGGAGAAATGGAAGTTCAGTTATTGAATTCAATCAGTTGTATGCCTTTACCGATGTAAATGGCAACGTAACTTGGTGGTATGCCCCAGGTGCAACCAGCAGTACCCCTGTCGTTATGCGAGATAGTCCAATCAACGACGGGAAGTTTAGACCTTTCTTCGATAAAGGTAACATTCAAGAAACTTACGCCCCTATCCTTTCCCCTGTCTTCCGTGGAAACCCTACCGTACCCCTTGCTGCTGAAGGCGATAGCTCATTTACTATCGCGAACACCGCTTGGGTTAGCCGAGAAATAGAAAAAGTACGTGGTGAGGTTCTTGAAGAATCCAGAGGTGAATTCCAAAACATTATCGTTGCAGATGATGCGAGTCTGAAAGATCTCTATGTAAGTGGAGAAACCATCTTTACTGGTGATAGGATCGCTGCTCTTGATGCCGAGTTATCTTTAAAAAGATTACGAATGACAGGTACAGGCGCAGAAATCGCATTTGAACAAAATGGTGTTCCACCCCAAGCAGGATTAACAAAAAGAACAAATATCAAACCTTTCCAAGTCACCACTGGGGTTGTTGATACAGATAATATAACTGCGAGAGAGATCAAGGTTGGAAATACCTCTGTTTCCACGAATTCCCTCGATGTTGATGGATTCATGCAAGGTGACTATCTTCACTTACAGGGTAATGCCAACAACGCAGAAGACCGCCCACAACTGATCGTTGACGGTGTTGCGGAAATAAATACTCTTCGTGTGACGAACACCATTGAAGGATTGAAGGCTGACGTTGAAGGTCTGGATATTAATCCTAACAGTATTGTGGTTGAAAGAACTGCGGAGATCAAGGGAAATACAACCCTTGGTGCAGATCTTTCCGTTTCTGGCAATACCGTATTGAAAGATGTACGCATCGATGGTACTCTTACTGGCGCGGGAATCGGCGTTGATGGTAAAGATATTTCTCCTCGTAACGTGAGTGCAACATCCGTAACAGTTGCAGAGAATTTAAATATCACAGGTCCAACTAATGCTTCCGGCGATGTTACAGTAAACAACCTCACTGTTAACGGGACACTTAGAGCAGATATCGATTTTGGAACAAGTGCTGTTGAATTTCAAGATTTAACTGTAACCAATAGAGCTACGATTAAAGATCTTGAGATCACTGGCAACGTTACAGGTTTTACTCCCTCTGTTGATGGAGAAGCAATATCCCCTTCATCTGTGACAACGACAGGGAACATTGATGTTGGAAACAATCTACGTGTCCGTGGCGATCTTAGCCTAGATGGTGAATTGAGCCTTCCAAGCTTAGATACTGGAGATATCTCCGCTGCTGAAATTGACGCTGCAAGTCTTTCGGTTAGTGGTGACATTACCGCAGGGACAACCTCGACTACAACGGTTAATAATCTTGTGGTAACAGGAACCACTACAGGAATCACTGTAACGGGAAATGTTGATGGGCAAGACATTCTCCCATCGTCGGTAGAAACAACGTCTGTAGAAGCTTCTGAGAGCGTTACAACGGCAAACCTGACAGCCACTGGAGAAACTCAGGTAAATAACCTGACAATCACGGGAACTGTAACAGGTTTTGAAGTAGACCTCACTGGAAGGGACATTCAGGTTAATACCCTGACGGTTACTCGTGGATCAACTTTTGACGAGGTTACTGCTAATAACATAACCAACAATCAAAAGATTACTACGGTAGATCTTCAGGTAACTGGAAACCTGACAAATGCCAATGGTGAGCAATTCTTTGCAAACGTCACTGGTCAAGACATTCTTCCAAATAGTGTGCAGTCTGCAACGTCTGTGAGAACTAAAACGCTACGTGTCGAAGAGACTAGCCTCTTGGAAGGTGCTGTTACCTTAAATGATGGTTTGACTATCACCGCTGGTAATATCACATCTGTTCAAGGTCAAGCAAGCTTCAATGACGTACAGGTATTTGGATCTCTTCTGGACGCGAATGGTAACGCCTTAGGGACAGCGGAAAGCATAAACGGTAAAGATATCTCTCCCCGTAGCGTAACCGCTCAAGTTGAGATTCAGACTACTGCAATTGTTGCTACAGGTCAAGCTGAAGTTGGTTCTTTGATTTCAACTGGACAAGTAACGGCAGGAAGCTTAGAGGTTTCAGGGATAGGCAACATTGATCAAGTCATCACCGATGATATCCGTGCTGGTAAAGTGACTTCCGGTAACACTGTTATCACTCGCACTGTCGGGTCTAATGACCCCGCTCTTGAAGTTCGTGGACCAGGTGAGATTCAGGGCGACCTTAATGTAACCGGAACTGTAACTGGTAACATTGACCTTAGCTCTCAAGACGTTAACGTTGCTTCTATGACCTCAACGGGAACAGTAAATGCCCTTTCCATTGAGTCTCGTACATCGGTAACTGGATTGTCTGGTACATTCGGTGAAGATTATGAAGGTGCACCTACCTATGGTATAACTTCTCTTTCCGGCGCAAACATCAACAAGAACCTTCGAGTTGGTGGAAACCTGACTGTTGTTGGTAACATCTCTGGCAATATCGACTTATCTGGAAAGGCGATCGAGCCTGCATCTTTGTCTACCACGACAGCTACGTTAACGACGGCGAACATAACAGACCTGACTGTAACTGGTCAGTTTAATATCCCGACTGTACCGTTAAATGTTCAATCCCTTAGTTCTGAAAACGCTATTTCTGCAAGCAAGTTCAGCACCACACCAAAAGAAGTAAGCACCACCTCTTCTTCTTACATCCCAGACGGCTCAACGAGCATATATAACGTAAACGTTATAAATGATGTTGAAGTGAAAGCGCCGATTGGCCTGTTGAGTTCAGGAAAAGGTGAGTCAGTATTCCTCTTCTTTGAACAGGATGGTACTGGTGGACATGCGGTAACATTCGGATCGGAGTTTGTTGTGCACGGTACTGAAACCATCAACACAGATGCAAACACTGTGTCGGTAGTTAACATGGTTTATCGTGGCAAAGGCCCATTGATTGACGTATTCATCACTCGTCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
54bf5e06b369af1fd9d9187e8eec7f6304ffd60de285e3b9d93424d79e151ebd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5443
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50