Protein

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Genbank accession
AUR82177.1 [GenBank]
Protein name
FCCH domain ubiquitin-activating enzyme E1
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPKITQRSFTSGEIAPALQSRADLTKYATSLHLCENFLVRAQGGVYSRPGFRFVGELDNSARVGRLIPFSFNTEQTYMLVFEHLKVRVIKDGGFVLDGGGPAIFELATPYTEAQLPRLGFTQNADVMTIVHPDHDPRNLNRMADDNWSLTTIDYAPTVDSPTFSSGSVDKAITGISQSNPAVVTAVAHGFVTGNLISINGVAGMTQVNGRSFIITALTNDTFELNGEDSTGHDPYTSGGTASRQNGATTIGEGFGDYDKTYTYVVTAVDAEGSESLASAEVSITTGSLATTAGVRLTWDSVPEATYYRVYKDPSVGTGIYGWIGDSNNNSFDDYNVAPITSDAPPSDRRPFDGEGNKPSAVTYYQQRQVFANTYNEPQATFTTQTNNFDSLRVSNPARDDDAVTWTIAARQVNEIRHLLPLDTLLILTSGAEWKTTEGDTGVLTPSTIGVRIQSYNGCSIIPPVVINSTALYLQEKGTRLRDLSYEFSSDKYTGNDLSLMSEHLFEGHTIVSMAYADEPYSIVWCVRDDGVLLGLTYQREHQVWGWHKHTTQGEFEYVATVTEGSRDAVYAIVKRTVNGSVVRYVERLEPRESINAEDCFYLDSGLTYDGDPATVISGLDHLNGETVSILTDGYTVPDQVVEDGKVTLVRAASKVHVGLSYLPAIETLDIDTPSPSQTLKAQSVSVSKVTIEVDGSRGGWVGPRQDNGDLAPMSEIKPRFDSDNYDPIALKTYKSEVFIQPQWGKGGGVRIEQRAPLPMSILSIIPQIDIGGN
Physico‐chemical
properties
protein length:773 AA
molecular weight: 84222,50990 Da
isoelectric point:4,74022
aromaticity:0,08926
hydropathy:-0,29043

Domains

Domains [InterPro]
DC_0058
STR
1–768
DC_0058
IPR042302
STR
168–243
IPR042302
IPR032418
RBD
179–242
IPR032418
AUR82177.1
1 773
Architecture
STR
STR 1-768 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR82177.1
1 773
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,9937
Central domain 157 358 203 0,1536
C-terminal 359 773 414 0,0785
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-358
C-terminal
359-773

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.021.C._10N.222.51.F9
[NCBI] 		1881417 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82177.1 [NCBI]
Genbank nucleotide accession
MG592405 [NCBI]
CDS location
range 9437 -> 11758
strand +
CDS
ATGCCGAAAATCACACAGCGTAGCTTTACATCAGGTGAAATTGCGCCAGCATTACAATCTCGTGCTGACCTCACCAAGTACGCTACCAGTTTACATCTTTGTGAGAACTTCCTGGTGCGTGCACAGGGTGGTGTTTACTCACGTCCTGGGTTCAGGTTCGTCGGTGAGCTTGATAATTCTGCTCGTGTGGGTCGCCTTATCCCCTTCAGCTTCAACACTGAACAGACTTACATGCTCGTGTTTGAGCACTTGAAAGTCCGTGTGATTAAAGACGGTGGGTTCGTGCTTGACGGTGGTGGACCTGCAATCTTTGAACTTGCTACACCTTACACTGAAGCACAGTTACCACGTTTAGGGTTCACACAGAACGCTGACGTGATGACAATCGTTCACCCTGACCATGACCCTCGTAACCTAAACCGTATGGCTGATGATAATTGGTCATTGACGACAATTGATTATGCACCGACTGTTGACAGCCCAACGTTCAGCAGTGGGTCAGTGGATAAAGCAATCACAGGTATTTCTCAATCGAACCCTGCTGTGGTAACTGCTGTGGCTCACGGGTTCGTCACTGGTAACCTGATCAGCATCAACGGTGTAGCAGGTATGACGCAAGTGAATGGTCGCTCGTTCATCATCACAGCGTTAACCAACGACACATTTGAGCTTAACGGTGAAGACTCCACAGGTCACGACCCGTACACGTCAGGTGGTACAGCTAGTCGCCAGAACGGTGCAACAACCATCGGTGAAGGTTTCGGTGACTATGACAAGACATATACATACGTTGTGACTGCTGTTGATGCTGAAGGTTCTGAATCGCTGGCATCTGCTGAAGTGAGTATCACAACAGGTTCACTGGCAACTACAGCAGGTGTACGTTTAACCTGGGACAGTGTACCTGAAGCAACTTATTACCGTGTTTACAAAGACCCTTCAGTGGGTACAGGTATCTATGGTTGGATCGGTGACTCGAACAACAATTCATTTGACGACTACAATGTTGCACCTATCACCAGTGATGCACCACCGTCTGATCGCAGACCGTTCGATGGTGAAGGTAACAAACCATCTGCTGTGACCTATTACCAGCAACGTCAGGTCTTTGCTAACACCTACAATGAACCACAGGCGACGTTTACCACACAGACAAATAACTTCGATTCACTGCGAGTGTCTAACCCTGCTCGTGATGATGATGCGGTGACATGGACCATTGCTGCACGACAGGTCAATGAAATACGTCACTTGCTACCGCTTGATACACTGTTGATCCTGACATCAGGTGCTGAGTGGAAGACTACTGAAGGTGACACTGGGGTATTAACACCGTCAACGATTGGTGTACGCATCCAGTCATACAACGGCTGTTCAATCATTCCACCGGTTGTGATCAACAGTACAGCGTTATACCTGCAAGAGAAAGGTACACGACTCCGTGACCTGAGTTATGAGTTCAGCAGTGACAAGTATACCGGTAACGATTTATCACTGATGTCAGAACACCTGTTTGAAGGTCACACGATTGTATCAATGGCGTATGCAGATGAACCATACAGCATTGTGTGGTGTGTCCGTGATGACGGTGTACTGTTGGGTTTAACTTATCAGCGTGAACATCAGGTGTGGGGTTGGCACAAGCACACGACACAGGGTGAATTTGAATACGTCGCAACAGTCACTGAGGGAAGTCGTGACGCTGTGTATGCTATCGTGAAGCGCACAGTCAATGGTTCAGTAGTTCGATATGTTGAGCGACTTGAACCACGTGAGTCAATCAATGCTGAAGACTGTTTCTATCTCGATTCTGGTCTGACGTATGACGGTGACCCTGCAACCGTGATCAGTGGTCTTGACCATTTGAACGGTGAGACTGTGAGCATCTTGACTGACGGTTACACTGTACCTGACCAGGTTGTTGAAGATGGTAAGGTCACACTTGTACGAGCTGCTTCAAAGGTTCATGTGGGTCTGAGCTACTTACCTGCAATTGAAACATTGGACATTGATACACCGTCACCAAGTCAGACATTGAAAGCACAATCAGTCTCGGTGTCGAAGGTCACCATTGAGGTTGATGGTTCTCGTGGTGGTTGGGTAGGTCCACGTCAGGACAATGGTGACCTTGCACCGATGAGTGAGATCAAGCCACGTTTCGACAGTGATAACTATGACCCTATTGCATTGAAGACATACAAATCTGAAGTGTTCATTCAACCGCAATGGGGTAAAGGTGGTGGTGTCCGTATTGAACAGCGTGCACCGTTACCAATGTCTATACTTTCAATAATTCCACAAATCGATATAGGCGGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3b0dde642b1428122778bbb169e99d469d6174068c3e94b05022708b20f3fcf8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9176
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank