Protein

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Genbank accession
NP_046916.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATSTPIRGRKGGSSSSRTPTEQPDDLQSVAKAKILVALGEGEFAGQLTAKDIYLDGTPLENADGSQNFSGVAWEFRPGTQAQNYIQGIPGTENEISVGTEVSSATAWTHTFTNTQLSAVRLRLKWPSLFKQEDDGDLVGYSINYAIDLQTDGGTWQTVLNTSVTGKTTSGYERSHRIDLPQAGSTWTVRIRKLTADANSAKIGDKMTLQSYTEVIDAKLRYPNTALLYIEFDSSQFNGSIPQISCEPRGRVIRVPDTYDPETRTYNGTWLGTFKWAWTDNPAWIFYDLVVSDRFGLGDRLTAANIDKWTLYQVAQYCDQPVPDGKGGSGTEPRYTCNVYVQERNDAYTVLRDFAAIFRGMTYWGGDQIVALADMPRDVDYSYTRANVVDGRFTYSGSTTKTRYTTALVSWSDPGNAYADAMEPVFEQELVSRFGSNQLEMTAIGCTRQSEANRKGRWGILTNNKDRVVSFNVGLDGNIPQPGYIIAVADELLSGKVMGGRIRAVNGRVITLDRDSAAAAGSRLMVNLPSGASQSRTIQSVNGRAVTVTTAYSETPEVESVWIVESDELYAQQYRVISVADNNDGTFSISGVFHDPDKYARIDTGAIIDQRPISVIPPGNQSAPANIVISSFSVVQQNVSVETMRVSWDQAKNAIAYEAQWRRNDGNWVNVPRSSTTSFDVPGIYAGRYLVRVRAINAAEISSGWGYSEEKTLTGKVGNPPKPVGFTATGINWGIRLNWGFPANTGDTLKTEIQYTANSDFSDPLLLTDVPYPSSEYIQLGLKAGQEFWYRAQLVDRTGNESGYTDWIRGMSNDNADDYLGDLADDFMKAEDGERLTGDIDTNIEGILQNALANHGTVEHQWAQYGEVRADILVVKTTIAEVDRAMAEMSTQVQAQISDVTAALEDKLTAVVDASGASAIYTLKAGVRINGIMYNAGMSIAVLAQAGQPIVTRVGFNANQFVLMSGSGDTQYSPFAVVNGQVFISSAFIQDGTITNAKIGNFIQSNNYVAGQSGWKLDKGGTWENYGSDGEGARKTTNVTDSIRDANGVLRVQIGKITGVF
Physico‐chemical
properties
protein length:1061 AA
molecular weight: 115800,22050 Da
isoelectric point:4,87186
aromaticity:0,09425
hydropathy:-0,34552

Domains

Domains [InterPro]
DC_0014
STR
1–1061
DC_0014
IPR053171
Unmapped
5–845
IPR053171 IPR015406
IPR055385
ATT
92–218
IPR055385 IPR032876 IPR003961 IPR003961
IPR013783
STR
622–714
IPR013783 IPR003961
IPR003961
STR
623–717
IPR003961
IPR003961
STR
628–702
IPR003961
IPR036116
STR
637–702
IPR036116
NP_046916.1
1 1061
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-218 | STR 219-342 | ATT 343-505 | STR 506-1061
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_046916.1
1 1061
Domain Start End Length (AA) Confidence
N-terminal 1 540 540 0,7658
Central domain 541 1003 464 0,0414
C-terminal 1004 1061 57 0,7359
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-540
Central
541-1003
C-terminal
1004-1061

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage N15
[NCBI] 		1604876 Uroviricota > Caudoviricetes > Ravinvirus >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_046916.1 [NCBI]
Genbank nucleotide accession
NC_001901 [NCBI]
CDS location
range 15342 -> 18527
strand +
CDS
ATGGCTACATCTACTCCGATTAGAGGCCGCAAGGGCGGCAGCTCCAGTTCCCGCACCCCTACCGAACAACCAGACGATCTCCAGTCCGTAGCGAAGGCCAAGATTCTTGTTGCGCTGGGAGAGGGGGAATTTGCCGGGCAGCTAACGGCTAAAGATATTTATCTTGATGGCACACCACTTGAGAACGCTGATGGGTCGCAGAACTTTAGCGGCGTGGCGTGGGAGTTCCGTCCGGGGACTCAGGCTCAAAACTACATCCAGGGAATCCCCGGTACCGAGAATGAAATCAGCGTCGGTACCGAAGTTTCAAGCGCTACCGCCTGGACGCACACCTTTACCAATACCCAACTGTCAGCTGTTCGTCTGCGGCTCAAATGGCCATCGCTGTTTAAACAGGAGGACGACGGCGATCTGGTTGGCTATTCGATTAACTACGCTATTGATCTGCAGACCGATGGCGGCACCTGGCAGACGGTGCTTAATACCAGCGTAACCGGGAAAACAACATCCGGCTACGAGCGCAGCCACCGTATCGACTTACCACAGGCGGGAAGCACATGGACGGTACGCATTCGCAAGCTCACGGCAGATGCCAATAGCGCGAAAATAGGCGACAAGATGACGCTGCAGAGCTACACAGAGGTCATTGACGCCAAACTGCGTTATCCAAATACCGCGCTGCTGTACATCGAATTCGACTCAAGCCAGTTTAACGGCTCTATCCCGCAAATATCCTGCGAACCGCGAGGGCGTGTTATCCGCGTACCGGATACTTACGACCCAGAAACCCGCACTTATAACGGCACCTGGCTGGGGACGTTTAAATGGGCATGGACTGATAATCCGGCCTGGATTTTTTACGATCTGGTGGTGAGTGACCGCTTTGGCCTTGGCGACCGCCTGACGGCAGCAAATATTGATAAATGGACGCTTTACCAGGTTGCACAATATTGCGATCAGCCGGTACCAGACGGAAAAGGCGGTTCCGGCACCGAGCCTCGCTATACCTGTAACGTGTATGTGCAGGAGAGGAATGACGCTTATACCGTTTTGCGTGATTTTGCGGCCATATTCCGTGGCATGACGTACTGGGGCGGCGATCAAATCGTTGCGCTGGCTGATATGCCCCGCGATGTGGATTACAGCTATACGCGCGCTAATGTGGTTGACGGCCGTTTTACCTATTCAGGCAGCACCACGAAAACCCGCTACACCACGGCACTGGTTTCCTGGTCCGATCCGGGCAACGCCTATGCAGACGCGATGGAGCCTGTATTTGAACAGGAACTCGTGTCCCGCTTTGGTTCAAACCAGCTCGAAATGACAGCTATTGGTTGTACCCGACAGTCAGAGGCAAACCGTAAGGGGCGCTGGGGTATCCTGACCAATAATAAGGATCGCGTCGTATCGTTCAATGTCGGTCTGGACGGCAACATTCCACAGCCCGGTTATATTATTGCGGTTGCCGATGAGCTGCTATCCGGGAAGGTGATGGGAGGGCGTATCAGAGCGGTTAATGGTCGCGTCATTACTCTAGATCGTGATTCTGCAGCAGCAGCCGGAAGCCGCCTCATGGTTAACCTGCCGTCTGGCGCATCGCAGAGCAGGACGATACAGAGCGTAAACGGTCGGGCGGTCACCGTGACCACGGCATACAGCGAAACGCCGGAAGTAGAATCGGTGTGGATTGTCGAATCCGACGAGCTTTATGCGCAGCAATATCGCGTTATTAGCGTCGCTGATAATAATGATGGAACGTTTTCGATTTCGGGTGTTTTTCACGATCCGGATAAGTATGCCCGTATTGATACCGGCGCAATCATCGACCAGCGACCAATAAGCGTTATTCCTCCAGGTAACCAGTCTGCGCCAGCCAATATTGTGATCAGCTCGTTTTCGGTGGTTCAGCAGAATGTCAGCGTTGAGACCATGCGCGTCAGCTGGGACCAGGCGAAAAACGCAATTGCCTATGAGGCACAGTGGCGTCGTAATGACGGGAACTGGGTGAATGTGCCGCGCAGCTCCACCACATCCTTCGATGTTCCGGGCATTTACGCAGGACGCTATCTGGTTCGTGTGCGTGCCATAAATGCCGCCGAAATTTCGTCCGGATGGGGCTATTCAGAAGAGAAAACGCTGACGGGGAAAGTGGGCAATCCGCCAAAGCCTGTTGGATTCACGGCCACGGGCATTAACTGGGGGATTCGTCTGAACTGGGGGTTTCCGGCAAACACCGGCGATACGTTAAAAACGGAAATCCAGTACACAGCTAATAGCGACTTTTCAGATCCTTTGCTGCTTACCGACGTCCCATATCCCTCATCTGAATATATCCAGCTTGGACTGAAGGCTGGGCAAGAGTTCTGGTACCGCGCGCAGCTGGTCGACAGAACGGGTAACGAGTCCGGGTATACCGACTGGATAAGGGGGATGTCTAACGATAATGCCGATGATTATCTTGGCGATCTTGCAGACGACTTTATGAAGGCGGAGGACGGGGAGCGTCTTACCGGTGATATAGATACCAATATTGAGGGAATACTGCAGAACGCGCTGGCCAATCATGGAACAGTCGAGCATCAATGGGCGCAATACGGAGAAGTTCGTGCCGATATTCTTGTAGTCAAAACGACTATTGCTGAAGTTGACAGGGCAATGGCCGAAATGTCAACTCAGGTGCAGGCGCAGATAAGCGACGTCACTGCGGCACTGGAGGACAAACTTACCGCCGTGGTCGATGCCTCCGGCGCTTCGGCGATCTACACCCTTAAAGCAGGCGTGAGGATAAACGGCATCATGTATAACGCAGGGATGTCGATTGCCGTTCTGGCGCAGGCAGGGCAGCCGATTGTTACCCGCGTAGGTTTCAACGCTAACCAGTTCGTGCTGATGAGTGGCAGTGGTGATACCCAGTATTCGCCGTTCGCGGTGGTTAATGGCCAGGTCTTTATCAGCTCTGCGTTTATCCAGGATGGCACGATCACGAATGCCAAAATCGGTAATTTTATCCAGTCCAACAATTATGTCGCCGGGCAGTCCGGGTGGAAACTGGATAAAGGAGGTACCTGGGAAAACTACGGCAGCGACGGGGAGGGCGCAAGAAAGACTACGAATGTAACGGACAGCATCAGGGACGCGAACGGCGTTCTCCGCGTACAGATTGGTAAAATTACGGGGGTATTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
56eb5fe89641c79469e3960b124ad4b0e95ae0b5de8adc796ed96d6aea0c2e68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8201
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the primary immunity region of the Escherichia coli linear plasmid prophage N15 Lobocka,M.B., Svarchevsky,A.N., Rybchin,V.N. and Yarmolinsky,M.B. 1996 8631680 GenBank
Proteins responsible for lysogenic conversion caused by coliphages N15 and phi80 are highly homologous Vostrov,A.A., Vostrukhina,O.A., Svarchevsky,A.N. and Rybchin,V.N. 1996 8631731 GenBank