Protein

View in Explore
Genbank accession
QIG74524.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRLSVSTDEFPETDITTGALYYGSETIDISGAIAGKCYDVFLTVDGLVIGPEWTNGTTRSLQVQKDGDRIVNAISFGGIEAGDAELVGGFRCHSNGQTRSTKQSRLVWSLNDAVLLPVCRIEAAQGWSYSIAQWRQANGNPLNQIEIFCGVSGRMIDVTASAYMLSSTSSVSSGFVGIGLDTSSADSSQVKNPAAGANTFPILPAWARYVGYAGIGYHELRWLERGVGGSAQTWLGNGGQPHGYQTGILGSVVL
Physico‐chemical
properties
protein length:254 AA
molecular weight: 26924,76070 Da
isoelectric point:5,02107
aromaticity:0,09055
hydropathy:-0,03425

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y25
[NCBI] 		2509588 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG74524.1 [NCBI]
Genbank nucleotide accession
MN988538.1 [NCBI]
CDS location
range 15224 -> 15988
strand +
CDS
ATGCGTCTCTCAGTATCAACAGATGAATTCCCCGAAACGGACATCACGACCGGCGCCCTCTATTATGGGAGCGAAACCATCGACATATCCGGCGCCATCGCTGGCAAGTGCTACGATGTTTTCTTGACGGTCGACGGCCTTGTCATCGGCCCTGAATGGACGAACGGCACTACGCGCTCGCTTCAGGTGCAGAAGGACGGCGACAGGATTGTCAACGCGATCTCATTCGGCGGGATCGAAGCCGGCGATGCGGAACTGGTTGGCGGGTTTCGCTGCCATTCGAACGGCCAGACGCGAAGCACGAAGCAATCTCGTCTGGTCTGGAGCCTGAATGATGCGGTCCTTCTCCCGGTCTGCCGGATCGAGGCCGCGCAGGGCTGGTCATATTCCATTGCCCAATGGAGGCAGGCAAACGGCAACCCGCTGAATCAGATCGAGATATTCTGCGGCGTCTCGGGCCGGATGATAGATGTCACGGCTTCGGCCTACATGCTCAGCAGCACATCATCTGTGTCATCCGGCTTCGTTGGCATCGGCCTCGACACATCATCTGCCGATAGTTCCCAGGTAAAGAACCCGGCAGCCGGAGCGAACACGTTTCCTATCTTGCCAGCGTGGGCGCGATATGTTGGATATGCCGGCATCGGTTACCATGAATTGCGGTGGCTGGAACGTGGTGTAGGCGGGAGCGCTCAGACTTGGCTTGGAAACGGCGGTCAACCGCATGGCTATCAAACCGGTATTCTCGGATCGGTGGTGCTTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
15b720707d1413c40dc6dde4bf3437b08b39e08e9d3cd45d6496ff1c70bdafdd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9468
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank