Protein

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Genbank accession
YP_717700.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAKTGLLAQSKPAAATNTVLYKAPIGNSASAVLTVANDGTGSAYSLALKDWDQKLTLDANSYLLHPGDVITAYRIDVDTDMNANSGFTSGLALTSGDEEKVFQFESFYVPAFTEIFVKDVALRQVTIESVTGNFEVGQTLTTGTSPDDTEATVFAVDDTGANTILYIGPSTINGTGAEFTDGDIVATAFGGSATISAGGIAAAVNAFVFSTTTAGGVYDYAQNGLEIFADRAYRFDVSDSSMTGRDFKLSITANGEWGPDGVIGGDPSDDGTEYTTNKTINGTAGSASAYVQYDLAGTGITGSLYFYDGGTGTAGNSIYGGTSRVLSTSNQYTYTGMYVYNVNGDLSGGTVTFTHNDVTYTIDSVTVGAYGYVRSYVGTELRVCLGAGSTDFAGTNTFRDNPISQTATRNTATVSSVDAGSADVDNESYLIISKTNAANNIDRTTSLVVGPGEKLIVSSTTQNNVFNLVGFEDVSTSFTTRVNVADYGGAGAGDGGGGVAP
Physico‐chemical
properties
protein length:501 AA
molecular weight: 51719,65070 Da
isoelectric point:4,09800
aromaticity:0,09780
hydropathy:-0,07585

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage syn9
[NCBI] 		382359 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 8012
[NCBI] 		166313 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_717700.1 [NCBI]
Genbank nucleotide accession
NC_008296 [NCBI]
CDS location
range 22406 -> 23911
strand +
CDS
ATGGCAAAAACAGGACTACTTGCACAATCGAAGCCAGCGGCGGCAACTAATACGGTCTTATATAAAGCACCTATTGGTAACTCTGCCAGTGCTGTGCTTACGGTTGCAAACGACGGCACAGGATCTGCATATTCCTTAGCATTAAAGGATTGGGATCAGAAACTAACCCTAGATGCTAACTCATATCTTCTTCACCCTGGTGATGTAATCACGGCATATCGTATTGATGTAGATACAGATATGAATGCTAACTCTGGATTTACATCTGGTCTTGCACTTACATCTGGGGATGAAGAAAAAGTTTTCCAGTTTGAATCATTCTATGTCCCTGCTTTTACTGAGATTTTTGTAAAAGATGTTGCTCTTCGTCAAGTTACTATTGAATCTGTAACTGGTAACTTTGAAGTTGGTCAGACTCTTACAACTGGCACTTCCCCTGATGACACAGAAGCAACTGTATTTGCTGTAGATGACACGGGTGCAAATACAATTCTTTACATCGGTCCCTCTACCATCAATGGCACTGGAGCAGAATTTACTGATGGTGATATTGTAGCAACTGCTTTTGGTGGTAGTGCTACTATTTCAGCAGGTGGTATTGCAGCAGCAGTGAATGCATTTGTATTCTCAACAACTACAGCAGGTGGTGTTTACGATTATGCTCAGAATGGTTTAGAAATCTTTGCTGACCGTGCATATCGTTTTGATGTCTCTGACTCTTCTATGACAGGTAGAGATTTCAAACTGTCTATTACTGCTAATGGTGAATGGGGTCCTGATGGTGTGATTGGTGGAGATCCCTCTGACGATGGCACAGAGTATACTACCAATAAAACTATCAACGGCACTGCTGGTAGTGCTAGTGCATATGTCCAATATGATCTTGCTGGCACTGGCATTACTGGTAGTTTGTATTTCTATGATGGTGGCACAGGCACCGCAGGTAACTCTATCTACGGTGGCACCAGCAGAGTACTTAGCACATCAAACCAGTATACTTACACTGGCATGTATGTTTATAATGTAAATGGTGATCTGAGTGGTGGCACCGTAACCTTTACTCATAACGACGTTACATATACTATTGACTCTGTAACCGTAGGTGCATATGGTTATGTCCGTAGTTATGTTGGCACTGAATTGCGTGTATGTCTTGGTGCAGGATCTACAGACTTTGCAGGCACTAATACATTCAGAGATAACCCAATTTCACAAACTGCAACTAGAAACACTGCAACTGTCAGTAGTGTAGATGCAGGATCTGCTGATGTAGATAATGAGAGTTATCTGATCATTAGTAAAACCAATGCTGCAAATAACATTGATCGCACAACTTCTTTGGTTGTTGGTCCTGGAGAAAAACTAATTGTAAGTTCTACAACACAAAACAATGTGTTTAACCTTGTAGGATTTGAAGATGTTTCCACTTCCTTCACTACTAGAGTTAATGTTGCTGATTATGGCGGCGCAGGTGCTGGCGATGGTGGCGGCGGAGTCGCTCCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1df2838ef633a083d886bf1b4f86c7dbef434f6a4986f31cdf9a83c878af559b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3967
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage Syn9 Hendrix,R.W., Pedulla,M.L., Peebles,C.L., Pope,W., Houtz,J.M., Smith,A.L., Hatfull,G.F. and King,J.A. 2003-10 — GenBank