Protein

View in Explore
Genbank accession
WXX18563.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSTTYNNYTGDGSTVAYTYTFSVSNNSAINVYVGGALKTTGYSINTVLKAVIFDTAPAAGVSILLVRVTDLDNLNKFGQGAAFTGTNLDENFSIITDVAQEASDTAQRTSGLALRVAASEGSIDEIPSAATRKGKLLGFHGTTAQPVAIPPESGTASDVLLLLSSPAGAGLIGTESGDTLASADLHLRTDLASTGADKGSALVATVQPYADAVARSQAAVNAQVVSIKDFLGDEYSGASDASQGFTEANAQVPKSVRILVPAGNYRLDSDVDCVGRHFLFEEPVNFTGTGYLKWAVIHRIDGTTGAISVGNEGVRGSDSYPQYGSNYKFGNTAGNVSGLQVGGGVPINGTYGNVFFADGYSSWTSIQPSRYPSPAELAVQPASLAGNCTMNAGTNVVTVLSGPGLRTEDVGKTVWIRDSGYTVLSVASGSFTVKNLDNSPVSFPSTASATYLCCYIWGRGKCNVNGKNITRVSGDPFVPLNNVPTTFVVNGVTTVQDGYTDSWNATLAASAGTANGVDYYWWGSVDNLAAAIRVHRCTGAGFEENLSIIASSRGFYHIHAAGGNNFQYPIYLGTGYDPDGLARRQITIDGVNGIVTIGGYYGRAAAEFGYRTFSTGDVNRFRFDSATSGNSPAFTAVGPDANINTIVAAKGTGFIRVDSELRFNAAIYPNLDNTYTVGRSGLRPSSIWAANGTIQTSDGTMKTDINDCDLATEFIKGLHPVSYKFINGGNTLTEVDDGYEEVQRQVTELVNKSEEVNETVTVDGVTKIVRRYKTVVVESPVFDSVPVVDEHGNFLEMASVPRMETVRVPKRKTVVTPVAGKRTHYGLIAQEVKALLDKLGIDDFGGYVVGEDGRLGLRYEQFIAPIVATLQDILKRIEQLESK
Physico‐chemical
properties
protein length:883 AA
molecular weight: 93443,85880 Da
isoelectric point:5,07489
aromaticity:0,08947
hydropathy:-0,09830

Domains

Domains [InterPro]
DC_1894
ATT
1–290
DC_1894 IPR044914 Coil
IPR005604
ATT
3–111
IPR005604 IPR012334 DC_2001
IPR030392
CHP
697–883
IPR030392
WXX18563.1
1 883
Architecture
ATT
STR
RBD
STR
CHP
ATT 1-290 | STR 291-367 | RBD 625-639 | STR 640-847 | CHP 848-883
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WXX18563.1
1 883
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,9920
Central domain 241 600 361 0,9545
C-terminal 601 883 282 0,7345
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-600
C-terminal
601-883

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage ROV85
[NCBI] 		3134915 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WXX18563.1 [NCBI]
Genbank nucleotide accession
PP526764 [NCBI]
CDS location
range 16824 -> 19475
strand +
CDS
ATGTCAACTACATACAACAACTACACAGGCGATGGTTCTACTGTCGCCTACACATATACATTTAGCGTATCTAACAATTCCGCGATAAACGTATATGTAGGCGGAGCACTAAAAACCACTGGGTACTCGATAAACACAGTGTTAAAGGCAGTTATATTCGATACCGCACCTGCTGCTGGTGTGTCTATTTTACTGGTTAGGGTCACAGACTTGGACAACTTAAACAAGTTTGGGCAAGGTGCGGCTTTTACTGGTACAAACTTAGACGAGAATTTCTCGATTATAACTGATGTTGCTCAGGAAGCCTCTGATACTGCACAGCGTACATCAGGACTGGCCTTACGTGTGGCGGCCAGTGAGGGCAGTATCGACGAAATACCTAGCGCAGCAACACGAAAAGGTAAGCTATTAGGCTTCCACGGCACAACAGCCCAGCCAGTTGCAATTCCGCCTGAAAGCGGTACAGCCTCAGACGTTCTACTTCTACTGTCCAGCCCAGCCGGGGCTGGCCTTATTGGTACTGAGTCAGGAGATACGCTGGCCAGTGCAGACTTGCATTTACGCACTGACCTAGCCAGCACTGGTGCTGACAAAGGCAGTGCGTTGGTGGCTACTGTTCAGCCGTACGCAGATGCAGTAGCTAGATCACAGGCTGCTGTAAACGCCCAAGTTGTGAGCATAAAGGATTTTCTAGGTGATGAGTACAGCGGAGCCTCTGACGCATCACAAGGTTTCACTGAGGCCAATGCTCAGGTGCCAAAGAGCGTACGCATATTAGTACCAGCAGGTAACTATAGGCTGGACTCGGATGTAGACTGCGTAGGTAGGCATTTTCTTTTTGAGGAGCCAGTTAACTTCACAGGTACAGGCTACCTAAAATGGGCAGTTATCCACCGCATAGATGGTACTACCGGTGCTATTAGTGTAGGTAATGAGGGTGTGCGTGGCTCTGATAGTTACCCGCAGTATGGTTCCAACTATAAGTTTGGCAACACTGCCGGGAATGTCTCAGGGTTGCAGGTAGGCGGTGGTGTGCCTATCAACGGCACATATGGCAACGTGTTCTTCGCGGATGGCTACAGTTCTTGGACGTCCATCCAGCCAAGCAGATACCCCAGCCCTGCGGAACTTGCTGTACAACCCGCAAGCCTTGCTGGTAACTGCACCATGAACGCAGGTACTAATGTGGTGACTGTACTGAGCGGCCCCGGCCTGCGTACGGAAGATGTTGGTAAAACCGTCTGGATTAGGGATTCAGGCTATACGGTACTATCCGTGGCTTCTGGCAGTTTCACTGTGAAAAATCTGGACAATAGCCCGGTATCATTCCCTTCAACTGCGTCTGCCACATATCTGTGCTGCTATATTTGGGGCCGTGGTAAGTGCAATGTAAATGGGAAGAACATTACTAGGGTATCTGGAGACCCCTTCGTACCGCTGAATAACGTACCAACTACCTTCGTTGTTAATGGGGTTACTACCGTACAGGATGGCTACACAGATTCTTGGAACGCTACTCTAGCTGCTAGTGCTGGTACTGCTAATGGTGTTGACTATTACTGGTGGGGTAGCGTTGATAACCTTGCGGCTGCTATACGAGTCCATAGATGTACTGGTGCAGGCTTCGAGGAGAACCTGTCCATTATAGCCTCATCTAGAGGGTTCTATCACATCCACGCAGCAGGCGGTAATAACTTCCAGTACCCGATATATTTAGGTACGGGTTATGACCCTGACGGGTTAGCAAGACGGCAGATAACGATTGATGGTGTTAACGGCATAGTCACAATTGGTGGTTATTATGGCCGGGCCGCTGCTGAGTTTGGCTACAGAACATTCTCTACCGGGGATGTTAATAGGTTCAGATTCGACAGCGCAACTTCTGGTAACTCACCAGCGTTTACTGCTGTCGGGCCAGACGCGAATATAAATACCATTGTCGCTGCAAAAGGCACAGGGTTCATACGGGTGGATAGTGAGCTGCGCTTCAACGCAGCAATATACCCGAATCTGGACAACACGTACACAGTCGGCAGGTCAGGGCTTAGACCGTCTTCTATTTGGGCTGCTAATGGTACCATCCAGACGTCAGATGGTACGATGAAGACCGATATTAATGATTGTGACCTAGCTACGGAGTTCATAAAAGGACTTCACCCAGTCTCTTACAAGTTCATTAATGGCGGTAACACTCTGACTGAGGTGGATGACGGCTATGAGGAAGTTCAGCGTCAAGTCACGGAGCTAGTCAACAAATCGGAAGAGGTCAACGAAACTGTCACAGTAGATGGCGTTACTAAAATAGTGCGGCGCTACAAAACAGTTGTCGTCGAAAGTCCTGTATTTGACAGCGTACCCGTAGTGGATGAGCACGGTAACTTTCTTGAGATGGCTAGCGTACCTAGGATGGAGACTGTACGCGTTCCTAAGCGTAAGACTGTCGTTACTCCAGTTGCAGGGAAGCGTACGCACTACGGCTTGATAGCGCAGGAAGTTAAAGCTCTCCTTGACAAACTTGGCATCGACGACTTTGGTGGGTACGTGGTTGGAGAGGATGGCAGACTTGGACTGCGCTACGAGCAGTTCATTGCACCGATAGTGGCCACTCTACAGGACATCCTAAAGCGTATAGAACAACTAGAATCCAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
39ac80f92fd69376cd6d667ee133bbaf05595558bf2aff053e81dba04b1aaf5b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6541
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Could bacteriophages be used as a novel pest management tool to control gut endosymbionts in Western Flower Thrips? Krueger,S., Kroj,A., Lehnherr,T., Lehnherr,H. and Stuiver,M. 2024 — GenBank