Protein

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Genbank accession
AYD79945.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MANNIQTIVSNKAESWSNAIHIKRYPSGKLKFLVVGGTFENSSDQIEVTADQFGMYNFTVTATPPTKQYEAKHVTVYYDYAGQWTLLQEASRNLLQTLSKTVTPKALMSGFDALYKSDSVDPEFGEAVIAFGAAQNSMAAFDALVPKKLSSVTLNESAFDYKLPVWFVADKATQKIHLFNSPSSADGLIRYKTISQEFAEALAFYSPATHRRTIAIFSSNGVVSRYNVRMEAQPNINLGYRVVRVVLLKAAGAFDPLFAVFDSEGRIHKLDSSFTELSVKSDDYYVNCHESLDAYITRSGKLVGTDVWQTPDAASFFYAFAPGTDDVYAINFADNSLSRYVIKTGVKFNAGTQDGNHLRYPTTFTNPASSVLLEAGSDTTGRKSFVERTLPITDVSSRNWSYLNLMSNGETTPLYGFVARPTLTLTHTYLPTFGATLPTYNVPLGKKVTFNFTATLDDADDSLPIVLPAGIVWTATVNNTPVKTVRNGEQVTVVAEHAYLTAQPFPFSVGRSNGLVEVVPDPLPDPFTFDTIYDVPDYSWQQTVEKQITGVNQRVEFSVLIDGAEQNDRVEVFVNGVKTPAPVFLYNGDKFYLRVKHGYNITLIKVIAGEYETDWGIYTVSEIQFDPVPNRAYAQAGKEYRTVVLTNDGITALALTIDSDDGEFIQGGKEVTLEIGQSTQLLFTPPEPNKKYQIKFGSSRYKYTWDIWTHETWLDAQPAPTYSNGMVVASSDPLKFDEIPPNFLTDISVPAGILFEVDGTDIEAPIDSRAMYKNSFELKDVSCDSILKLESYPAHMQPKILKLGNAEISWLHDFAGTVVYSAQFDSVPDAVDLAELKYAFESRGQDYSTQAASGNDRIPSIFEFAFAIDYAGQEATFNEEYAAALLYRSTQMNLVREEWHLFAAQLMDMPAYGYATESSYGTKDGFTYGDSVYVDSVPGEFSNSFSDLDERVLIVDGVITPRVSKWNEVNIGDAFDVADIAREWNAVSDRIDTTPQIVEPYEPVHQIPAAPVYYVEGTNKGIFPAEPYYIQLTTPAKNETHVMWIQATLVPNYDAFEAAETMAYNYNKVDAAESDWYLPANPSSAHDMDWRNTVDEVHRIDAVNPRPIVYLQPTAEYKPPLPHWFELNPSYEMSPDSHFIFAPLTYKYLADPRQAKSALSYAIGTNIENKVPGNIYNLDTAVERKVDSAAYSHETDHWFKVAPDVYKPKASDAELVSVQVIVAGEYAPRVIENAAYPVERMKVTMFVPKTEYGEQDPLKKGYFATELDALQNAVNVWHKTPDEVFGIQQPDGTWTWAIKIPCGEYCGEFGCDTRGYLAGG
Physico‐chemical
properties
protein length:1320 AA
molecular weight: 147072,80740 Da
isoelectric point:4,74233
aromaticity:0,12424
hydropathy:-0,26121

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage vB_DsoM_JA11
[NCBI] 		2382310 Uroviricota > Caudoviricetes > Salmondvirus >
Host Dickeya solani
[NCBI] 		1089444 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYD79945.1 [NCBI]
Genbank nucleotide accession
MH389777.1 [NCBI]
CDS location
range 111711 -> 115673
strand -
CDS
ATGGCCAATAACATTCAGACGATTGTTTCAAACAAAGCTGAATCTTGGTCAAACGCGATTCATATTAAACGTTATCCTTCCGGCAAACTGAAATTTTTAGTTGTCGGTGGTACGTTTGAAAACTCTTCGGATCAAATAGAAGTAACGGCTGATCAGTTTGGCATGTATAACTTTACTGTCACTGCTACGCCGCCGACGAAACAATATGAAGCCAAACACGTAACTGTTTATTACGACTACGCCGGGCAGTGGACTTTGCTGCAAGAGGCGTCTCGTAACTTATTGCAGACTCTCAGCAAAACAGTTACGCCGAAAGCACTGATGAGCGGTTTTGACGCGCTTTATAAATCTGATTCTGTTGATCCGGAATTCGGTGAAGCCGTCATTGCGTTTGGTGCTGCTCAGAATTCGATGGCTGCATTTGATGCGCTCGTTCCGAAAAAACTTTCAAGCGTAACGCTGAATGAATCGGCATTTGATTACAAGTTGCCTGTCTGGTTCGTTGCTGATAAAGCTACGCAGAAGATCCACCTTTTTAATAGTCCGTCTAGTGCTGATGGTTTGATTCGCTATAAAACCATTTCGCAGGAATTCGCAGAAGCACTCGCGTTTTATTCTCCTGCAACGCATCGACGCACGATTGCAATTTTTTCTTCGAACGGCGTAGTTTCTCGATATAACGTTCGAATGGAAGCGCAGCCAAATATCAATCTCGGTTATCGAGTTGTTCGTGTTGTTCTTCTAAAAGCTGCTGGCGCATTTGATCCGTTATTTGCGGTATTCGATAGCGAAGGCAGGATTCATAAACTTGATTCCTCGTTTACGGAACTCAGTGTTAAGAGTGATGACTATTACGTTAACTGCCACGAGAGCCTTGATGCGTATATTACGCGTAGCGGTAAACTCGTAGGCACTGATGTTTGGCAAACTCCTGATGCTGCAAGTTTCTTTTATGCGTTCGCTCCGGGAACCGATGATGTTTACGCAATAAATTTTGCGGATAACTCTCTTTCTCGTTACGTGATAAAAACTGGCGTTAAATTTAACGCAGGTACGCAAGACGGGAATCATCTTCGCTATCCAACAACTTTCACGAATCCAGCTTCTTCTGTTCTTCTTGAGGCAGGTAGTGATACAACCGGGCGTAAAAGTTTTGTTGAAAGAACATTGCCGATCACGGATGTAAGTTCGCGCAACTGGTCTTATTTAAACTTGATGAGTAACGGAGAAACAACTCCGCTTTATGGTTTTGTTGCTCGTCCGACATTAACTCTTACGCACACTTATTTGCCTACCTTCGGTGCAACGTTGCCGACTTATAACGTTCCACTTGGCAAAAAAGTTACGTTTAACTTTACTGCGACACTGGATGATGCAGACGATTCGCTTCCGATTGTTTTGCCTGCTGGCATTGTGTGGACTGCTACGGTCAACAATACTCCGGTAAAAACAGTTCGTAACGGCGAGCAAGTTACTGTAGTTGCAGAGCACGCATATTTAACGGCGCAGCCTTTCCCGTTTAGCGTAGGCCGCTCAAATGGTTTGGTTGAAGTGGTTCCTGATCCGCTTCCTGATCCATTTACCTTTGACACAATTTACGATGTTCCGGATTATAGCTGGCAACAAACAGTAGAAAAACAGATTACTGGTGTGAACCAGCGTGTCGAATTCTCTGTTCTGATTGATGGCGCTGAACAGAATGATCGTGTTGAAGTATTCGTTAATGGCGTGAAAACTCCGGCACCTGTGTTCCTGTACAACGGCGATAAGTTTTATTTGCGCGTCAAGCATGGATACAACATCACTTTGATCAAAGTGATTGCGGGAGAGTATGAAACTGATTGGGGAATTTATACTGTTTCGGAAATTCAATTCGATCCGGTTCCTAATCGCGCTTATGCTCAAGCTGGAAAAGAATATCGCACTGTTGTTTTAACTAACGATGGGATCACGGCGCTTGCGCTCACGATTGATTCCGACGATGGGGAATTCATTCAGGGCGGGAAAGAGGTAACGCTGGAGATCGGACAGTCAACACAACTTCTGTTCACGCCACCGGAACCGAACAAGAAATATCAAATCAAATTTGGTAGTTCTCGTTATAAGTATACGTGGGATATATGGACGCATGAAACTTGGCTGGACGCGCAGCCTGCACCAACTTATTCTAATGGGATGGTTGTTGCATCAAGCGATCCGTTGAAGTTCGATGAAATTCCACCAAACTTTCTTACGGATATTTCTGTACCTGCTGGCATTTTGTTTGAGGTTGACGGCACTGATATTGAAGCGCCGATTGACTCACGCGCGATGTACAAAAATAGTTTTGAGTTGAAGGATGTTTCGTGTGATTCGATTCTGAAACTAGAATCCTATCCGGCACATATGCAACCTAAAATTCTGAAACTAGGTAACGCAGAAATTTCGTGGCTTCATGATTTCGCTGGCACCGTGGTTTATTCCGCGCAATTTGATTCTGTTCCGGATGCTGTTGATTTGGCAGAGTTGAAATATGCTTTCGAATCGCGGGGGCAAGATTATTCTACGCAAGCCGCTTCTGGAAATGATCGGATTCCTTCTATATTTGAGTTTGCTTTTGCAATTGATTATGCAGGACAGGAAGCAACCTTTAACGAGGAATACGCTGCTGCCTTGCTGTATCGTTCAACTCAAATGAATTTAGTTCGTGAAGAGTGGCATTTATTCGCAGCGCAGTTAATGGATATGCCTGCATATGGGTATGCGACAGAATCGAGCTATGGAACGAAAGACGGTTTCACCTACGGCGATTCTGTGTATGTCGATTCTGTTCCGGGTGAGTTTAGCAATTCGTTTTCGGATCTAGACGAGAGAGTTTTAATCGTAGATGGTGTAATCACGCCTCGCGTTTCTAAATGGAACGAAGTGAATATTGGCGATGCTTTTGATGTTGCTGATATTGCGCGTGAATGGAATGCTGTTTCTGATCGTATTGACACTACGCCGCAAATTGTTGAACCGTATGAACCTGTTCATCAAATTCCGGCTGCTCCTGTTTATTACGTCGAAGGAACCAACAAAGGGATCTTCCCTGCTGAACCATATTACATCCAACTTACTACGCCTGCGAAAAATGAAACTCATGTGATGTGGATTCAGGCGACACTGGTTCCGAACTATGACGCGTTCGAAGCCGCAGAAACTATGGCATATAACTACAACAAAGTTGATGCCGCAGAATCTGATTGGTATCTGCCTGCGAATCCATCATCGGCGCACGATATGGATTGGAGAAACACCGTTGATGAAGTTCATCGAATCGACGCTGTTAATCCGCGTCCTATCGTTTATCTGCAACCTACCGCAGAATATAAACCGCCGTTGCCTCATTGGTTTGAATTGAATCCGTCTTACGAAATGTCGCCGGACTCTCATTTCATTTTCGCACCATTGACTTATAAGTATCTCGCCGATCCACGACAAGCGAAGAGTGCGCTCTCGTATGCCATTGGAACGAATATCGAGAATAAAGTGCCGGGGAATATTTATAATCTCGACACTGCTGTTGAAAGGAAAGTTGACAGCGCTGCTTACAGTCATGAAACGGATCATTGGTTCAAAGTCGCTCCGGATGTTTATAAACCAAAAGCGTCTGATGCTGAATTGGTTTCCGTTCAAGTTATTGTTGCTGGAGAATACGCACCTCGCGTAATCGAAAATGCTGCTTATCCTGTTGAGCGTATGAAAGTGACAATGTTTGTTCCGAAAACTGAATACGGCGAACAAGATCCTCTCAAGAAAGGTTATTTTGCAACTGAACTTGATGCGCTGCAAAACGCTGTCAATGTTTGGCACAAAACACCTGATGAAGTATTTGGCATTCAACAACCCGATGGAACATGGACGTGGGCTATCAAAATTCCTTGCGGGGAATATTGTGGTGAATTCGGTTGTGACACTCGCGGCTATCTCGCAGGTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9695f718f87d6839661f8aa6e3549c1c7919da0059b3fbf5ee7b9c617ae5aa36
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3550
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo bacteriophages are represented within an increasing diversity of environmental viruses infecting the emerging phytopathogen, Dickeya solani Day,A.W., Ahn,J. and Salmond,G.P.C. 2018 — GenBank